RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 SPRY1O43609 319 aaPredicted RBP10.9□□□□□ -0.66
UBFD1-205ENST00000566136 KRT86O43790 486 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 KCNK5O95279 499 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 OPN1MWP04001 364 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 ASGR1P07306 291 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 SPARCP09486 303 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 OPN1MW2P0DN77 364 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 OPN1MW3P0DN78 364 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 HSD17B4P51659 736 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 FKBP3Q00688 224 aaKnown RBP10.9□□□□□ -0.66
UBFD1-205ENST00000566136 PPP3CAQ08209 521 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 ELP6Q0PNE2 266 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 ITGA7Q13683 1181 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 KHDC1Q4VXA5 237 aaKnown RBP10.9□□□□□ -0.66
UBFD1-205ENST00000566136 FIGNQ5HY92 759 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 PM20D1Q6GTS8 502 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 TAOK1Q7L7X3 1001 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 DSG4Q86SJ6 1040 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 FAM129CQ86XR2 697 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 SCFD1Q8WVM8 642 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 OPTNQ96CV9 577 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 NELFAQ9H3P2 528 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 TMOD2Q9NZR1 351 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 SNX9Q9Y5X1 595 aa10.9□□□□□ -0.66
UBFD1-205ENST00000566136 ATRNL1Q5VV63 1379 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 SOCS6O14544 535 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 MSH4O15457 936 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 MEFVO15553 781 aaPredicted RBP10.9□□□□□ -0.67
UBFD1-205ENST00000566136 RGS19P49795 217 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 SOX10P56693 466 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 KCNMA1Q12791 1236 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 SLC13A2Q13183 592 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 VGLL4Q14135 290 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 AARDQ4LEZ3 155 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 TRAPPC11Q7Z392 1133 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 POGLUT1Q8NBL1 392 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 PTPN18Q99952 460 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 RTKNQ9BST9 563 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 PCDHAC1Q9H158 963 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 SEMA3GQ9NS98 782 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 PLAGL2Q9UPG8 496 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 SLC30A1Q9Y6M5 507 aa10.9□□□□□ -0.67
UBFD1-205ENST00000566136 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 C16orf96A6NNT2 1141 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 FKTNO75072 461 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 SPATA31C1P0DKV0 1188 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 SREBF1P36956 1147 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 LIPEQ05469 1076 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 GABPB1Q06547 395 aaPredicted RBP10.89□□□□□ -0.67
UBFD1-205ENST00000566136 CETN1Q12798 172 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 TUBB2AQ13885 445 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 LBRQ14739 615 aaKnown RBP10.89□□□□□ -0.67
UBFD1-205ENST00000566136 SPA17Q15506 151 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 KIZQ2M2Z5 673 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 C2orf76Q3KRA6 126 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 C16orf59Q7L2K0 433 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 SCN4BQ8IWT1 228 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.89□□□□□ -0.67
UBFD1-205ENST00000566136 CCHCR1Q8TD31 782 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 PPP1R13LQ8WUF5 828 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 RAPGEF5Q92565 580 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 GIMAP5Q96F15 307 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 TCTN2Q96GX1 697 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 TUBB2BQ9BVA1 445 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 NRSN2Q9GZP1 204 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 MUC13Q9H3R2 512 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 DKK3Q9UBP4 350 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 NCF1BA6NI72 391 aaPredicted RBP10.89□□□□□ -0.67
UBFD1-205ENST00000566136 ENO4A6NNW6 628 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 NCF1CA8MVU1 366 aaPredicted RBP10.89□□□□□ -0.67
UBFD1-205ENST00000566136 RSPH10B2B2RC85 870 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 PCDH17O14917 1159 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 ZNF185O15231 689 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 POLR3GO15318 223 aaPredicted RBP10.89□□□□□ -0.67
UBFD1-205ENST00000566136 TRIM16O95361 564 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 ZIC2O95409 532 aaPredicted RBP10.89□□□□□ -0.67
UBFD1-205ENST00000566136 RSPH10BP0C881 870 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 VAV2P52735 878 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 NPRL3Q12980 569 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 NNTQ13423 1086 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 Q4G0T1 1027 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 CACNA2D4Q7Z3S7 1137 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 SFR1Q86XK3 245 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 OR56A3Q8NH54 315 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 LINC00615Q96LM1 132 aaPredicted RBP10.89□□□□□ -0.67
UBFD1-205ENST00000566136 MMS19Q96T76 1030 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 IFIH1Q9BYX4 1025 aaKnown RBP10.89□□□□□ -0.67
UBFD1-205ENST00000566136 SUGCTQ9HAC7 445 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 CNIH4Q9P003 139 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 NCDNQ9UBB6 729 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 ADAM30Q9UKF2 790 aa10.89□□□□□ -0.67
UBFD1-205ENST00000566136 ABCB11O95342 1321 aa10.88□□□□□ -0.67
UBFD1-205ENST00000566136 ISM1B1AKI9 464 aa10.88□□□□□ -0.67
UBFD1-205ENST00000566136 CHMP2AO43633 222 aa10.88□□□□□ -0.67
UBFD1-205ENST00000566136 LTA4HP09960 611 aaKnown RBP10.88□□□□□ -0.67
UBFD1-205ENST00000566136 CD6P30203 668 aa10.88□□□□□ -0.67
UBFD1-205ENST00000566136 CCR10P46092 362 aa10.88□□□□□ -0.67
UBFD1-205ENST00000566136 VSNL1P62760 191 aa10.88□□□□□ -0.67
UBFD1-205ENST00000566136 RING1Q06587 406 aa10.88□□□□□ -0.67
UBFD1-205ENST00000566136 GIT2Q14161 759 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms