RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 C1orf74Q96LT6 269 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 SLC17A9Q9BYT1 436 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 CEP44Q9C0F1 390 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 ABCG4Q9H172 646 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 POLR1BQ9H9Y6 1135 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 TMEM51Q9NW97 253 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 NCKIPSDQ9NZQ3 722 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 MPP6Q9NZW5 540 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 RWDD2AQ9UIY3 292 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 SNX10Q9Y5X0 201 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 WASF2Q9Y6W5 498 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 COL27A1Q8IZC6 1860 aaPredicted RBP14.39□□□□□ -0.11
CDR2-204ENST00000564542 DOCK4Q8N1I0 1966 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 SPTY2D1-AS1A0A0U1RR47 76 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 ILVBLA1L0T0 632 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 CAPN8A6NHC0 703 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 H3BM21 787 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 RIOK3O14730 519 aaKnown RBP14.38□□□□□ -0.11
CDR2-204ENST00000564542 NEBLO76041 1014 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 CSF2P04141 144 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 MYF5P13349 255 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 CLCN1P35523 988 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 SCNN1AP37088 669 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 RABIFP47224 123 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 CFHR1Q03591 330 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 DEUP1Q05D60 604 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 MAPK8IP2Q13387 824 aaPredicted RBP14.38□□□□□ -0.11
CDR2-204ENST00000564542 FGL2Q14314 439 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 FZD2Q14332 565 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 SLC25A52Q3SY17 297 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 RETSATQ6NUM9 610 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 ZCCHC8Q6NZY4 707 aaKnown RBP14.38□□□□□ -0.11
CDR2-204ENST00000564542 IGF2-ASQ6U949 168 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 ZNF605Q86T29 641 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 CREBRFQ8IUR6 639 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 PCDH20Q8N6Y1 951 aaKnown RBP14.38□□□□□ -0.11
CDR2-204ENST00000564542 OR7D4Q8NG98 312 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 IFI44Q8TCB0 444 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 MAPK15Q8TD08 544 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 KCNE4Q8WWG9 221 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 NAF1Q96HR8 494 aaKnown RBP14.38□□□□□ -0.11
CDR2-204ENST00000564542 BMFQ96LC9 184 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 TBCBQ99426 244 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 SIX2Q9NPC8 291 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 ASCL3Q9NQ33 180 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 PLCB1Q9NQ66 1216 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 THSD1Q9NS62 852 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 ZNF212Q9UDV6 495 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 AJAP1Q9UKB5 411 aaPredicted RBP14.38□□□□□ -0.11
CDR2-204ENST00000564542 FADS3Q9Y5Q0 445 aa14.38□□□□□ -0.11
CDR2-204ENST00000564542 TRPM6Q9BX84 2022 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 POM121BA6NF01 834 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 RAD51BO15315 384 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 AP1G1O43747 822 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 ZMPSTE24O75844 475 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 ENDOD1O94919 500 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 L1CAMP32004 1257 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 CDH5P33151 784 aaPredicted RBP14.37□□□□□ -0.11
CDR2-204ENST00000564542 CCNHP51946 323 aaPredicted RBP14.37□□□□□ -0.11
CDR2-204ENST00000564542 RNASE9P60153 205 aaKnown RBP14.37□□□□□ -0.11
CDR2-204ENST00000564542 RHDQ02161 417 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 SLC20A2Q08357 652 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 ISXQ2M1V0 245 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 ARTNQ5T4W7 220 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 PARS2Q7L3T8 475 aaKnown RBP14.37□□□□□ -0.11
CDR2-204ENST00000564542 TMEM35BQ8NCS4 154 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 GRAMD1AQ96CP6 724 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 WBP1Q96G27 269 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 FEM1CQ96JP0 617 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 HEPHQ9BQS7 1158 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 ATP13A1Q9HD20 1204 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 TMPRSS4Q9NRS4 437 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 DNAJC12Q9UKB3 198 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 CSNK1G3Q9Y6M4 447 aa14.37□□□□□ -0.11
CDR2-204ENST00000564542 CXorf51AA0A1B0GTR3 108 aa14.36□□□□□ -0.11
CDR2-204ENST00000564542 FPGTO14772 594 aa14.36□□□□□ -0.11
CDR2-204ENST00000564542 PAK4O96013 591 aaPredicted RBP14.36□□□□□ -0.11
CDR2-204ENST00000564542 PNMA6AP0CW24 399 aaPredicted RBP14.36□□□□□ -0.11
CDR2-204ENST00000564542 GABRB2P47870 512 aa14.36□□□□□ -0.11
CDR2-204ENST00000564542 ARF5P84085 180 aa14.36□□□□□ -0.11
CDR2-204ENST00000564542 TAF1BQ53T94 588 aaPredicted RBP14.36□□□□□ -0.11
CDR2-204ENST00000564542 CARD16Q5EG05 197 aa14.36□□□□□ -0.11
CDR2-204ENST00000564542 FAM102AQ5T9C2 384 aaPredicted RBP14.36□□□□□ -0.11
CDR2-204ENST00000564542 FAM71AQ8IYT1 594 aa14.36□□□□□ -0.11
CDR2-204ENST00000564542 LENG8Q96PV6 779 aaPredicted RBP14.36□□□□□ -0.11
CDR2-204ENST00000564542 HAPLN3Q96S86 360 aa14.36□□□□□ -0.11
CDR2-204ENST00000564542 KLF6Q99612 283 aaPredicted RBP14.36□□□□□ -0.11
CDR2-204ENST00000564542 SPON2Q9BUD6 331 aa14.36□□□□□ -0.11
CDR2-204ENST00000564542 DPH1Q9BZG8 443 aa14.36□□□□□ -0.11
CDR2-204ENST00000564542 ZYG11BQ9C0D3 744 aa14.36□□□□□ -0.11
CDR2-204ENST00000564542 OSBPL2Q9H1P3 480 aa14.36□□□□□ -0.11
CDR2-204ENST00000564542 CPNE5Q9HCH3 593 aa14.36□□□□□ -0.11
CDR2-204ENST00000564542 SATB2Q9UPW6 733 aa14.36□□□□□ -0.11
CDR2-204ENST00000564542 FOXN3O00409 490 aaPredicted RBP14.35□□□□□ -0.11
CDR2-204ENST00000564542 KLK10O43240 276 aa14.35□□□□□ -0.11
CDR2-204ENST00000564542 AQP9O43315 295 aa14.35□□□□□ -0.11
CDR2-204ENST00000564542 TSPAN6O43657 245 aa14.35□□□□□ -0.11
CDR2-204ENST00000564542 SRGAP2O75044 1071 aa14.35□□□□□ -0.11
CDR2-204ENST00000564542 TGM2P21980 687 aa14.35□□□□□ -0.11
CDR2-204ENST00000564542 DNA2P51530 1060 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms