RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ARHGAP12Q8IWW6 846 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 SCML4Q8N228 414 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 GHDCQ8N2G8 530 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 WIPF2Q8TF74 440 aaPredicted RBP2.74□□□□□ -1.97
CHD9-209ENST00000564255 HDAC7Q8WUI4 952 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 PSPC1Q8WXF1 523 aaKnown RBP2.74□□□□□ -1.97
CHD9-209ENST00000564255 SMARCE1Q969G3 411 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 BAG1Q99933 345 aaPredicted RBP2.74□□□□□ -1.97
CHD9-209ENST00000564255 SMARCAD1Q9H4L7 1026 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 PDE7BQ9NP56 450 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.74□□□□□ -1.97
CHD9-209ENST00000564255 GRHL1Q9NZI5 618 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 CHORDC1Q9UHD1 332 aaPredicted RBP2.74□□□□□ -1.97
CHD9-209ENST00000564255 NOL7Q9UMY1 257 aaKnown RBP2.74□□□□□ -1.97
CHD9-209ENST00000564255 ADGRF5Q8IZF2 1346 aa2.74□□□□□ -1.97
CHD9-209ENST00000564255 MST1RQ04912 1400 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 A0A0A0MQY5 61 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 TCRBV7S3A2A0A539 114 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 FAM90A8PA6NJQ4 464 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 LRRC53A6NM62 1247 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 IFNL4K9M1U5 179 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 UBE2CO00762 179 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 SCAMP1O15126 338 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 ADAM20O43506 726 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 USP12O75317 370 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 SEC31AO94979 1220 aaKnown RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 FAM90A13PP0C7W8 464 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 FAM90A24PP0C7X0 464 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 PRR35P0CG20 571 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 GABRB1P18505 474 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 WT1P19544 449 aaPredicted RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 TTKP33981 857 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 COPB2P35606 906 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 PSMC6P62333 389 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 ROR1Q01973 937 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 CEBPZQ03701 1054 aaKnown RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 CDC16Q13042 620 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 SOWAHCQ53LP3 525 aaPredicted RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 C10orf76Q5T2E6 689 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 ERICH6BQ5W0A0 696 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 TBC1D9BQ66K14 1250 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 DHRS13Q6UX07 377 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 SLC29A4Q7RTT9 530 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 ADGRA1Q86SQ6 560 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 UEVLDQ8IX04 471 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 NELL1Q92832 810 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 ZNF764Q96H86 408 aaPredicted RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 ZMAT2Q96NC0 199 aaKnown RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 PLEKHA4Q9H4M7 779 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 CXorf56Q9H5V9 222 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 KAT14Q9H8E8 782 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 ZCCHC17Q9NP64 241 aaKnown RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 ASAH2Q9NR71 780 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 MARCH4Q9P2E8 410 aaPredicted RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 MKLN1Q9UL63 735 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 MAFFQ9ULX9 164 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 DHDHQ9UQ10 334 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 REXO2Q9Y3B8 237 aaKnown RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 A0A1W2PQ09 198 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 USP17L23D6RBM5 183 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 C1QTNF3-AMACRE9PGA6 284 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 SELLP14151 372 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 CDAP32320 146 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 SKIV2L2P42285 1042 aaKnown RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 HSD17B4P51659 736 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 YWHAZP63104 245 aaKnown RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 CSTF3Q12996 717 aaKnown RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 OLIG2Q13516 323 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 PKP1Q13835 747 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 KPNB1Q14974 876 aaKnown RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 ME3Q16798 604 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 ARL13AQ5H913 290 aaPredicted RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 KIAA1755Q5JYT7 1200 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 MOB3CQ70IA8 216 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 CHST9Q7L1S5 443 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 GRASPQ7Z6J2 395 aaPredicted RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 KLBQ86Z14 1044 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 TAGAPQ8N103 731 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 IP6K1Q92551 441 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 MMABQ96EY8 250 aaPredicted RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 YME1L1Q96TA2 773 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 FTOQ9C0B1 505 aaKnown RBP eCLIP2.73□□□□□ -1.97
CHD9-209ENST00000564255 IKZF4Q9H2S9 585 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 SH3GLB2Q9NR46 395 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 BABAM1Q9NWV8 329 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 CFDP1Q9UEE9 299 aaPredicted RBP2.73□□□□□ -1.97
CHD9-209ENST00000564255 AOX1Q06278 1338 aa2.73□□□□□ -1.97
CHD9-209ENST00000564255 TARSL2A2RTX5 802 aaKnown RBP2.72□□□□□ -1.97
CHD9-209ENST00000564255 FAM157AC9JC47 383 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 NPIPB11E5RHQ5 1161 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 HNRNPCP07910 306 aaKnown RBP eCLIP2.72□□□□□ -1.97
CHD9-209ENST00000564255 CHRM5P08912 532 aaPredicted RBP2.72□□□□□ -1.97
CHD9-209ENST00000564255 GLULP15104 373 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 PTPN2P17706 415 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 TBXAS1P24557 533 aaPredicted RBP2.72□□□□□ -1.97
CHD9-209ENST00000564255 PPARGP37231 505 aaPredicted RBP2.72□□□□□ -1.97
CHD9-209ENST00000564255 CENPAP49450 140 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 HDAC4P56524 1084 aa2.72□□□□□ -1.97
CHD9-209ENST00000564255 PCLAFQ15004 111 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms