RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 DOLKQ9UPQ8 538 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 SLC30A1Q9Y6M5 507 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 A0A1B0GTW7 788 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 TRIM64A6NGJ6 449 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 MEIS3P2A8K0S8 358 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 GLRA3O75311 464 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 CALB1P05937 261 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 TFPTP0C1Z6 253 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 PTPN2P17706 415 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 DCKP27707 260 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 EIF2B2P49770 351 aaKnown RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 THOP1P52888 689 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 BASP1P80723 227 aaKnown RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 RFTN1Q14699 578 aaPredicted RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 NDUFA5Q16718 116 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 C2CD6Q53TS8 623 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 DCAF6Q58WW2 860 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 KRT80Q6KB66 452 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 ZCCHC23Q6ZST2 131 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 ADGRF2Q8IZF7 708 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 FIBCD1Q8N539 461 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 C1orf127Q8N9H9 656 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 TNIP2Q8NFZ5 429 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 PDCD6IPQ8WUM4 868 aaKnown RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 STON2Q8WXE9 905 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 LPPQ93052 612 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 CFAP36Q96G28 342 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 SCLYQ96I15 445 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 ZMAT2Q96NC0 199 aaKnown RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 POPDC2Q9HBU9 364 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 EBF1Q9UH73 591 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 TCRBV5S1A1TA0A578 114 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 FAM159BA6NKW6 160 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 PITPNM1O00562 1244 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 XPOTO43592 962 aaKnown RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 LYPLA1O75608 230 aaPredicted RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 OXSR1O95747 527 aaPredicted RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 CALCAP01258 141 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 APOEP02649 317 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 XRCC1P18887 633 aaPredicted RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 NCF2P19878 526 aaPredicted RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 MMP8P22894 467 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 ME2P23368 584 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 ADSLP30566 484 aaPredicted RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 CCL23P55773 120 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 YWHAZP63104 245 aaKnown RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 IKBKEQ14164 716 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 PPP2R5DQ14738 602 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 HERC3Q15034 1050 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 RGS21Q2M5E4 152 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 ZNF699Q32M78 642 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 IL23RQ5VWK5 629 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 NANOGP8Q6NSW7 305 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 C16orf87Q6PH81 154 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 ARMCX6Q7L4S7 300 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 UNC45BQ8IWX7 931 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 HACE1Q8IYU2 909 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 PGAM4Q8N0Y7 254 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 PHTF2Q8N3S3 785 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 EFCAB3Q8N7B9 438 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 C18orf25Q96B23 403 aaPredicted RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 CNDP2Q96KP4 475 aaKnown RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 ZNF512Q96ME7 567 aaPredicted RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 ZFP42Q96MM3 310 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 SORT1Q99523 831 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 CAAP1Q9H8G2 361 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 APOBEC3GQ9HC16 384 aaKnown RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 DPP3Q9NY33 737 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 IPO11Q9UI26 975 aaKnown RBP11.23□□□□□ -0.61
TCF4-222ENST00000564228 SIX4Q9UIU6 781 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 ERGIC3Q9Y282 383 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 MICAL3Q7RTP6 2002 aa11.23□□□□□ -0.61
TCF4-222ENST00000564228 LOC100653049A0A140TA62 436 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 C7orf72A4D263 438 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 CXorf49A8MYA2 514 aaPredicted RBP11.22□□□□□ -0.61
TCF4-222ENST00000564228 MCF2LO15068 1137 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 DCXO43602 365 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 NBNO60934 754 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 KRT34O76011 436 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 KRT7P08729 469 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 ACO1P21399 889 aaKnown RBP11.22□□□□□ -0.61
TCF4-222ENST00000564228 POLR2BP30876 1174 aaKnown RBP11.22□□□□□ -0.61
TCF4-222ENST00000564228 RPL7AP62424 266 aaKnown RBP11.22□□□□□ -0.61
TCF4-222ENST00000564228 DSC3Q14574 896 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 IRAK1BP1Q5VVH5 260 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 EPGNQ6UW88 154 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 ALKAL1Q6UXT8 129 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 LYSMD3Q7Z3D4 306 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 NT5DC4Q86YG4 428 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 PCYOX1LQ8NBM8 494 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 MINDY2Q8NBR6 621 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 BHLHE22Q8NFJ8 381 aaPredicted RBP11.22□□□□□ -0.61
TCF4-222ENST00000564228 GSDMBQ8TAX9 411 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 TOP1MTQ969P6 601 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 CCDC138Q96M89 665 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 TOX2Q96NM4 488 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 PSD2Q9BQI7 771 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 SHCBP1LQ9BZQ2 653 aa11.22□□□□□ -0.61
TCF4-222ENST00000564228 RPF2Q9H7B2 306 aaKnown RBP11.22□□□□□ -0.61
TCF4-222ENST00000564228 ZC3H7BQ9UGR2 993 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms