RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 BPIFB4P59827 614 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 TLE3Q04726 772 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 CCDC15Q0P6D6 951 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 CCDC173Q0VFZ6 552 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 RAPGEF1Q13905 1077 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 FZD2Q14332 565 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 HSP90AA4PQ58FG1 418 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 TPRG1LQ5T0D9 272 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 KLHDC7AQ5VTJ3 777 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 ZNF783Q6ZMS7 281 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 CLEC17AQ6ZS10 378 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 PARS2Q7L3T8 475 aaKnown RBP17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 PTAR1Q7Z6K3 402 aaPredicted RBP17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 FAM131BQ86XD5 332 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 MLKLQ8NB16 471 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 BAP1Q92560 729 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 IFT43Q96FT9 208 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 FCRL3Q96P31 734 aaPredicted RBP17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 CEP44Q9C0F1 390 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 PDCL3Q9H2J4 239 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 ATP13A1Q9HD20 1204 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 NDFIP2Q9NV92 336 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 NLGN3Q9NZ94 848 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 KLF15Q9UIH9 416 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 FCF1Q9Y324 198 aaKnown RBP17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 HS3ST3A1Q9Y663 406 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 A6NNZ2 444 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 K7ESM1 405 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 SCAMP1O15126 338 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 ATXN7O15265 892 aaPredicted RBP17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 ITGB7P26010 798 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 L1CAMP32004 1257 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 GKP32189 559 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 ACTN2P35609 894 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 ACVRL1P37023 503 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 RECQLP46063 649 aaPredicted RBP17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 CCNHP51946 323 aaPredicted RBP17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 GNA12Q03113 381 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 MAPK8IP2Q13387 824 aaPredicted RBP17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 CARD16Q5EG05 197 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 KYAT3Q6YP21 454 aaKnown RBP17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 SPACA3Q8IXA5 215 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 PCDH20Q8N6Y1 951 aaKnown RBP17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 EMC1Q8N766 993 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 CPA5Q8WXQ8 436 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 SLC39A7Q92504 469 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 PPP1R16AQ96I34 528 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 HEPHQ9BQS7 1158 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 TUBGCP2Q9BSJ2 902 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 MAGEB5Q9BZ81 275 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 ZYG11BQ9C0D3 744 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 DNAJC28Q9NX36 388 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 PAXBP1Q9Y5B6 917 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 TRPM6Q9BX84 2022 aa17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 HELZ2Q9BYK8 2649 aaKnown RBP17.12■□□□□ 0.33
HDGFL3-203ENST00000563404 CFAP46Q8IYW2 2715 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 CSF2P04141 144 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 MPOP05164 745 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 MMEP08473 750 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 PRKCSHP14314 528 aaPredicted RBP17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 ABL2P42684 1182 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 DNA2P51530 1060 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 UBE2HP62256 183 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 RPS21P63220 83 aaKnown RBP17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 NOMO3P69849 1222 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 SLC20A2Q08357 652 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 TPD52L1Q16890 204 aaPredicted RBP17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 HS1BP3Q53T59 392 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 ACBD5Q5T8D3 534 aaPredicted RBP17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 KIAA1161Q6NSJ0 714 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 RETSATQ6NUM9 610 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 PCSK4Q6UW60 755 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 DRC7Q8IY82 874 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 FAM181AQ8N9Y4 354 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 ZNF548Q8NEK5 533 aaPredicted RBP17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 FEM1CQ96JP0 617 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 KLF6Q99612 283 aaPredicted RBP17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 PPARGC1AQ9UBK2 798 aaKnown RBP17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 GGT7Q9UJ14 662 aa17.11■□□□□ 0.33
HDGFL3-203ENST00000563404 SPTY2D1-AS1A0A0U1RR47 76 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 IGLON5A6NGN9 336 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 SPINT1O43278 529 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 AP1G1O43747 822 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 LSM8O95777 96 aaKnown RBP17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 ALPPL2P10696 532 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 NME1P15531 152 aaKnown RBP17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 ATP11AP98196 1134 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 DPCR1Q3MIW9 517 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 MANEALQ5VSG8 457 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 NAA35Q5VZE5 725 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 NLRP14Q86W24 1093 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 DCP2Q8IU60 420 aaKnown RBP17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 OR6K2Q8NGY2 324 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 FAM174AQ8TBP5 190 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 EPS8L1Q8TE68 723 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 HIC2Q96JB3 615 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 C1QTNF2Q9BXJ5 285 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 TM6SF2Q9BZW4 377 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 OSBPL2Q9H1P3 480 aa17.1■□□□□ 0.33
HDGFL3-203ENST00000563404 ZDHHC6Q9H6R6 413 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms