RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 TMEM159Q96B96 161 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 ABHD17AQ96GS6 310 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 IPO9Q96P70 1041 aaKnown RBP7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 HDAC8Q9BY41 377 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 IMPG2Q9BZV3 1241 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 LRRC27Q9C0I9 530 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 LRRN3Q9H3W5 708 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 PCDHB11Q9Y5F2 797 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 ADGRG4Q8IZF6 3080 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 AGRPO00253 132 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 O00370 1275 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 PIK3R2O00459 728 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 KPNA3O00505 521 aaPredicted RBP7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 MAPK13O15264 365 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 KLRC4O43908 158 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 SEMA7AO75326 666 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 CD2BP2O95400 341 aaKnown RBP7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 MOCS2O96007 188 aaPredicted RBP7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 MT-CO1P00395 513 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 IGLV3-25P01717 112 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 NR3C1P04150 777 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 ANXA6P08133 673 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 KRT7P08729 469 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 SRCP12931 536 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 LCP1P13796 627 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 LIFP15018 202 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 ZNF18P17022 549 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 COL8A1P27658 744 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 TNFRSF8P28908 595 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 CHRNA3P32297 505 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 DCTP40126 519 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 IRAK1P51617 712 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 VAMP7P51809 220 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 MAPK10P53779 464 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 MLLT10P55197 1068 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 SLC8A3P57103 927 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 RPS21P63220 83 aaKnown RBP7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 C16orf72Q14CZ0 275 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 SLC39A14Q15043 492 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 ACCSLQ4AC99 568 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 KIAA1161Q6NSJ0 714 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 ESRP1Q6NXG1 681 aaKnown RBP7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 PMF1Q6P1K2 205 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 TAC4Q86UU9 113 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 CHSY1Q86X52 802 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 CCDC117Q8IWD4 279 aaPredicted RBP7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 TTC39CQ8N584 583 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 ARL10Q8N8L6 244 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 PMEPA1Q969W9 287 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 EEF2KMTQ96G04 330 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 SERPINB11Q96P15 392 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 CATSPER2Q96P56 530 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 USP28Q96RU2 1077 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 FEM1AQ9BSK4 669 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 C1QTNF2Q9BXJ5 285 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 SRRTQ9BXP5 876 aaKnown RBP7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 CDH19Q9H159 772 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 BLZF1Q9H2G9 400 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 CUEDC2Q9H467 287 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 ZNF768Q9H5H4 540 aaKnown RBP7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 SLC25A13Q9UJS0 675 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 HS3ST2Q9Y278 367 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 FADS3Q9Y5Q0 445 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 WASF2Q9Y6W5 498 aa7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 RP1L1Q8IWN7 2480 aaPredicted RBP7.89□□□□□ -1.15
HERPUD1-206ENST00000563343 F8P00451 2351 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 PVALEFA0A1B0GWK0 134 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 A1L4Q6 167 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 TCAF2A6NFQ2 919 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 PRR19A6NJB7 356 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 STMND1H3BQB6 276 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 K7EM74 188 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 K7ERQ8 282 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 FPGTO14772 594 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 SMAD6O43541 496 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 AP1G1O43747 822 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 BNIP3LO60238 219 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 AGFG2O95081 481 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 PRKCGP05129 697 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 SETSIPP0DME0 302 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 CCL4P13236 92 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 NR1D1P20393 614 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 GNLYP22749 145 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 ELAVL4P26378 380 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 NOS2P35228 1153 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 IGFALSP35858 605 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 RGS7P49802 495 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 AMPD3Q01432 767 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 CEBPZQ03701 1054 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 STK4Q13043 487 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 FHL5Q5TD97 284 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 SYPL2Q5VXT5 272 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 ATCAYQ86WG3 371 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 UBR7Q8N806 425 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 DENND6BQ8NEG7 585 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 GPR156Q8NFN8 814 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 PCDH19Q8TAB3 1148 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 ASB12Q8WXK4 309 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 VOPP1Q96AW1 172 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 DHX58Q96C10 678 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms