RNA–Protein interactions for RNA: ENST00000563318.1

FANCA-210, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-210ENST00000563318 DEFB119Q8N690 84 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 SLC35G2Q8TBE7 412 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 PIP4K2CQ8TBX8 421 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 CASKIN2Q8WXE0 1202 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 RFFLQ8WZ73 363 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 PIGKQ92643 395 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 ARRDC3Q96B67 414 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 HINFPQ9BQA5 517 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 SLC39A8Q9C0K1 460 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 BTBD1Q9H0C5 482 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 TNKS2Q9H2K2 1166 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.52□□□□□ -0.41
FANCA-210ENST00000563318 FBXL12Q9NXK8 326 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 CTTNBP2NLQ9P2B4 639 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 RCOR3Q9P2K3 495 aaPredicted RBP12.52□□□□□ -0.41
FANCA-210ENST00000563318 LCMT1Q9UIC8 334 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 REXO2Q9Y3B8 237 aaKnown RBP12.52□□□□□ -0.41
FANCA-210ENST00000563318 ATXN2Q99700 1313 aaKnown RBP12.52□□□□□ -0.41
FANCA-210ENST00000563318 CEP192Q8TEP8 1941 aa12.52□□□□□ -0.41
FANCA-210ENST00000563318 J3KR12 359 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 SLC30A4O14863 429 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 SLC7A4O43246 635 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 SPINT1O43278 529 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 RNASEH1O60930 286 aaKnown RBP12.51□□□□□ -0.41
FANCA-210ENST00000563318 TMCC1O94876 653 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 SERPINF2P08697 491 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 CD48P09326 243 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 CCNHP51946 323 aaPredicted RBP12.51□□□□□ -0.41
FANCA-210ENST00000563318 GEMIN4P57678 1058 aaKnown RBP12.51□□□□□ -0.41
FANCA-210ENST00000563318 IRX4P78413 519 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 CNTN1Q12860 1018 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 CYTH1Q15438 398 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 ATP13A4Q4VNC1 1196 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 CARD16Q5EG05 197 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 PPP6R3Q5H9R7 873 aaPredicted RBP12.51□□□□□ -0.41
FANCA-210ENST00000563318 IL31Q6EBC2 164 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 FAM124AQ86V42 546 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 RHOT2Q8IXI1 618 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 OR2T34Q8NGX1 318 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 NETO1Q8TDF5 533 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 BIRC7Q96CA5 298 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 HDAC8Q9BY41 377 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 DEF6Q9H4E7 631 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 LHX3Q9UBR4 397 aa12.51□□□□□ -0.41
FANCA-210ENST00000563318 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 C3orf70A6NLC5 250 aaPredicted RBP12.5□□□□□ -0.41
FANCA-210ENST00000563318 ZNF487B1APH4 448 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 PLK4O00444 970 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 NDUFS2O75306 463 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 GJB3O75712 270 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 RNASEH2AO75792 299 aaKnown RBP12.5□□□□□ -0.41
FANCA-210ENST00000563318 IL1BP01584 269 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 HOXB3P14651 431 aaPredicted RBP12.5□□□□□ -0.41
FANCA-210ENST00000563318 MAOBP27338 520 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 ARHGAP25P42331 645 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 PAPOLAP51003 745 aaKnown RBP12.5□□□□□ -0.41
FANCA-210ENST00000563318 CCR5P51681 352 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 DPYSL3Q14195 570 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 DUOXA1Q1HG43 343 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 ACCSLQ4AC99 568 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 TRIM61Q5EBN2 209 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 WDR45BQ5MNZ6 344 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 FAM46CQ5VWP2 391 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 NCEH1Q6PIU2 408 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 RAD9BQ6WBX8 426 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 ARHGAP36Q6ZRI8 547 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 DSG4Q86SJ6 1040 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 VSIG1Q86XK7 387 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 HDDC3Q8N4P3 179 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 LZTR1Q8N653 840 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 TTC13Q8NBP0 860 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 OR2AP1Q8NGE2 309 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 CEP76Q8TAP6 659 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 CELF6Q96J87 481 aaKnown RBP12.5□□□□□ -0.41
FANCA-210ENST00000563318 NSMCE3Q96MG7 304 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 ZWILCHQ9H900 591 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 DONSONQ9NYP3 566 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 IL36AQ9UHA7 158 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 SALL4Q9UJQ4 1053 aa12.5□□□□□ -0.41
FANCA-210ENST00000563318 A0A0A6YYK5 440 aaPredicted RBP12.49□□□□□ -0.41
FANCA-210ENST00000563318 SOWAHDA6NJG2 315 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 C1QTNF3-AMACRE9PGA6 284 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 H3BRJ5 948 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 KHNYNO15037 678 aaKnown RBP12.49□□□□□ -0.41
FANCA-210ENST00000563318 LEFTY1O75610 366 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 PRNPP04156 253 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 AMPD1P23109 780 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 ITGB7P26010 798 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 CD27P26842 260 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 RGRP47804 291 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 PPP2CBP62714 309 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 PPP2CAP67775 309 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 SFSWAPQ12872 951 aaKnown RBP12.49□□□□□ -0.41
FANCA-210ENST00000563318 MMRN1Q13201 1228 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 PAFAH1B3Q15102 231 aaKnown RBP12.49□□□□□ -0.41
FANCA-210ENST00000563318 TAZQ16635 292 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 RSPO4Q2I0M5 234 aaPredicted RBP12.49□□□□□ -0.41
FANCA-210ENST00000563318 LRRC38Q5VT99 294 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 KIAA0895LQ68EN5 471 aa12.49□□□□□ -0.41
FANCA-210ENST00000563318 LEKR1Q6ZMV7 388 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms