RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 ACVRL1P37023 503 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 KLK7P49862 253 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 DNA2P51530 1060 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 NEK3P51956 506 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 FMO1Q01740 532 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 NRG1Q02297 640 aaPredicted RBP16.05■□□□□ 0.16
CLK3-211ENST00000563297 FGL2Q14314 439 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 RTP5Q14D33 572 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 C15orf59Q2T9L4 293 aaPredicted RBP16.05■□□□□ 0.16
CLK3-211ENST00000563297 CCDC14Q49A88 953 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 GCNT7Q6ZNI0 430 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 ABI3BPQ7Z7G0 1075 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 CACTIN-AS1Q8N1I8 211 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 OR4C6Q8NH72 309 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 RFFLQ8WZ73 363 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 NXPE2Q96DL1 559 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 PPP1R16AQ96I34 528 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 FEM1CQ96JP0 617 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 BMFQ96LC9 184 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 CALN1Q9BXU9 219 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 SLC17A9Q9BYT1 436 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 NRSN2Q9GZP1 204 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 FCF1Q9Y324 198 aaKnown RBP16.05■□□□□ 0.16
CLK3-211ENST00000563297 HS3ST3A1Q9Y663 406 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 AK5Q9Y6K8 562 aa16.05■□□□□ 0.16
CLK3-211ENST00000563297 FAM72CH0Y354 149 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 PIAS2O75928 621 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 PAK4O96013 591 aaPredicted RBP16.04■□□□□ 0.16
CLK3-211ENST00000563297 ADRB3P13945 408 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 ITGB7P26010 798 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 CCNHP51946 323 aaPredicted RBP16.04■□□□□ 0.16
CLK3-211ENST00000563297 POLR2FP61218 127 aaKnown RBP16.04■□□□□ 0.16
CLK3-211ENST00000563297 RPS21P63220 83 aaKnown RBP16.04■□□□□ 0.16
CLK3-211ENST00000563297 INSM1Q01101 510 aaPredicted RBP16.04■□□□□ 0.16
CLK3-211ENST00000563297 CDR2Q01850 454 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 SEMG2Q02383 582 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 CDO1Q16878 200 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 ARL13BQ3SXY8 428 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 FAM72AQ5TYM5 149 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 MANEALQ5VSG8 457 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 FAM72DQ6L9T8 149 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 Q6ZSR6 202 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 NLRP14Q86W24 1093 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 FAM72BQ86X60 149 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 PLPP6Q8IY26 295 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 SLC22A18ASQ8N1D0 253 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 JOSD2Q8TAC2 188 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 SLC30A5Q8TAD4 765 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 FAM174AQ8TBP5 190 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 ENOX1Q8TC92 643 aaKnown RBP16.04■□□□□ 0.16
CLK3-211ENST00000563297 ARHGEF2Q92974 986 aaKnown RBP16.04■□□□□ 0.16
CLK3-211ENST00000563297 ISG20Q96AZ6 181 aaKnown RBP16.04■□□□□ 0.16
CLK3-211ENST00000563297 OSBPL2Q9H1P3 480 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 RETREG1Q9H6L5 497 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 HECAQ9UBI9 543 aaPredicted RBP16.04■□□□□ 0.16
CLK3-211ENST00000563297 FADS3Q9Y5Q0 445 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 SHROOM3Q8TF72 1996 aa16.04■□□□□ 0.16
CLK3-211ENST00000563297 CXorf51AA0A1B0GTR3 108 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 POM121BA6NF01 834 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 C2CD4BA6NLJ0 364 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 EPHB6O15197 1021 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 TLX3O43711 291 aaPredicted RBP16.03■□□□□ 0.16
CLK3-211ENST00000563297 GJB6O95452 261 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 RHOQP17081 205 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 SDC4P31431 198 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 GKP32189 559 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 SOX5P35711 763 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 JAM2P57087 298 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 E2F1Q01094 437 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 PTP4A2Q12974 167 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 MAPK8IP2Q13387 824 aaPredicted RBP16.03■□□□□ 0.16
CLK3-211ENST00000563297 KRT31Q15323 416 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 ZNF542PQ5EBM4 170 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 CDKAL1Q5VV42 579 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 KIAA1161Q6NSJ0 714 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 RWDD4Q6NW29 188 aaKnown RBP16.03■□□□□ 0.16
CLK3-211ENST00000563297 PARS2Q7L3T8 475 aaKnown RBP16.03■□□□□ 0.16
CLK3-211ENST00000563297 DCP2Q8IU60 420 aaKnown RBP16.03■□□□□ 0.16
CLK3-211ENST00000563297 GPT2Q8TD30 523 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 CENPIQ92674 756 aaPredicted RBP16.03■□□□□ 0.16
CLK3-211ENST00000563297 VOPP1Q96AW1 172 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 IFT43Q96FT9 208 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 CRELD1Q96HD1 420 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 DCBLD2Q96PD2 775 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 TM6SF2Q9BZW4 377 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 NLRC4Q9NPP4 1024 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 TMEM248Q9NWD8 314 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 DNAI1Q9UI46 699 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 CLCA2Q9UQC9 943 aa16.03■□□□□ 0.16
CLK3-211ENST00000563297 A6NNZ2 444 aa16.02■□□□□ 0.16
CLK3-211ENST00000563297 RAD51BO15315 384 aa16.02■□□□□ 0.16
CLK3-211ENST00000563297 FFAR2O15552 330 aa16.02■□□□□ 0.16
CLK3-211ENST00000563297 AP1G1O43747 822 aa16.02■□□□□ 0.16
CLK3-211ENST00000563297 UNGP13051 313 aaPredicted RBP16.02■□□□□ 0.16
CLK3-211ENST00000563297 ITPKBP27987 946 aa16.02■□□□□ 0.16
CLK3-211ENST00000563297 ETFBP38117 255 aa16.02■□□□□ 0.16
CLK3-211ENST00000563297 EIF2S3P41091 472 aaKnown RBP16.02■□□□□ 0.16
CLK3-211ENST00000563297 PTPN9P43378 593 aa16.02■□□□□ 0.16
CLK3-211ENST00000563297 MAPKAPK2P49137 400 aa16.02■□□□□ 0.16
CLK3-211ENST00000563297 DAB2P98082 770 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms