RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 HNF1BP35680 557 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 KRT20P35900 424 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 PSMC2P35998 433 aaKnown RBP3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 RGS2P41220 211 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 MTNR1AP48039 350 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 PLCD1P51178 756 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 DRG2P55039 364 aaKnown RBP3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 PRKG2Q13237 762 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 FHL1Q13642 323 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 BYSLQ13895 437 aaKnown RBP3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 NAA25Q14CX7 972 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 C5orf22Q49AR2 442 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 Q4G0T1 1027 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 PIK3CD-AS1Q5SR53 167 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 NAA35Q5VZE5 725 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 TTLL5Q6EMB2 1281 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 ZNF517Q6ZMY9 492 aaPredicted RBP3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 ZNF793Q6ZN11 406 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 LRRC8DQ7L1W4 858 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 PIP4P1Q86T03 277 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 ANKRD13BQ86YJ7 626 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 ARMC8Q8IUR7 673 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 TMEM217Q8N7C4 229 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 TSPYL6Q8N831 410 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 SLC44A5Q8NCS7 719 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 LSM14AQ8ND56 463 aaKnown RBP3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 C1orf131Q8NDD1 294 aaKnown RBP3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 HDAC7Q8WUI4 952 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 RFFLQ8WZ73 363 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 ERP27Q96DN0 273 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 ZFYVE19Q96K21 471 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 C7orf26Q96N11 449 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 LBHD1Q9BQE6 289 aaPredicted RBP3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 NUDT16L1Q9BRJ7 211 aaKnown RBP3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 CADM1Q9BY67 442 aaKnown RBP3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 FTOQ9C0B1 505 aaKnown RBP eCLIP3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 VEZTQ9HBM0 779 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 SPAG4Q9NPE6 437 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 HAUS2Q9NVX0 235 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 ALKBH4Q9NXW9 302 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 CLIC5Q9NZA1 410 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 HDAC6Q9UBN7 1215 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 CNOT7Q9UIV1 285 aaKnown RBP3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 UTS2RQ9UKP6 389 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 GPR34Q9UPC5 381 aa3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.5□□□□□ -1.85
SHCBP1-202ENST00000563219 A0A087X0M5 115 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 TRBV5-7A0A0A0MS05 114 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 A0A1B0GX30 115 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 PI4KAP2A4QPH2 592 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 SH2D7A6NKC9 451 aaPredicted RBP3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 ADAM10O14672 748 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 FGBP02675 491 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 FCGR2AP12318 317 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 CYP2J2P51589 502 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 POLGP54098 1239 aaPredicted RBP3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 SETQ01105 290 aaPredicted RBP3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 MTX1Q13505 466 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 SH2D4BQ5SQS7 431 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 ASPHD1Q5U4P2 390 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 FAM171A1Q5VUB5 890 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 KDELC2Q7Z4H8 507 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 ADGRG6Q86SQ4 1221 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 TMTC2Q8N394 836 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 NANOGP1Q8N7R0 232 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 SCAIQ8N9R8 606 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 SETD9Q8NE22 299 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 MPLKIPQ8TAP9 179 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 MSI2Q96DH6 328 aaKnown RBP3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 ELP4Q96EB1 424 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 TIGD1Q96MW7 591 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 TEFMQ96QE5 360 aaKnown RBP3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 CD180Q99467 661 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 EYA3Q99504 573 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 CLSTN3Q9BQT9 956 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 TRMOQ9BU70 441 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 NPLQ9BXD5 320 aaPredicted RBP3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 PDCL3Q9H2J4 239 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 SLC32A1Q9H598 525 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 TTC12Q9H892 705 aaPredicted RBP3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 ACTR5Q9H9F9 607 aaPredicted RBP3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 ZNF304Q9HCX3 659 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 THSD1Q9NS62 852 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 RNF146Q9NTX7 359 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 ZDHHC7Q9NXF8 308 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 ADD3Q9UEY8 706 aaKnown RBP3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 TBC1D29Q9UFV1 150 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 FBXO40Q9UH90 709 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 POLG2Q9UHN1 485 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 CLDN16Q9Y5I7 305 aa3.49□□□□□ -1.85
SHCBP1-202ENST00000563219 MST1RQ04912 1400 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 GOLGA6L10A0A0M3HER8 536 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 ZNF814B7Z6K7 855 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 K7ENM7 598 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 TSPAN4O14817 238 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 INSIG1O15503 277 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 STRNO43815 780 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 HBP1O60381 514 aa3.48□□□□□ -1.85
SHCBP1-202ENST00000563219 ATG13O75143 517 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms