RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 TPSD1Q9BZJ3 242 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 WSB2Q9NYS7 404 aaPredicted RBP13.65□□□□□ -0.22
CDH1-204ENST00000562118 AMACRQ9UHK6 382 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 FZD4Q9ULV1 537 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 GUCA1BQ9UMX6 200 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 R4GN57 208 aa13.65□□□□□ -0.22
CDH1-204ENST00000562118 RNF103O00237 685 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 DFFAO00273 331 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 APOL1O14791 398 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 FTCDO95954 541 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 PYGMP11217 842 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 BCKDHBP21953 392 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 CHRNA3P32297 505 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 CCNHP51946 323 aaPredicted RBP13.64□□□□□ -0.23
CDH1-204ENST00000562118 NAP1L1P55209 391 aaKnown RBP13.64□□□□□ -0.23
CDH1-204ENST00000562118 BYSLQ13895 437 aaKnown RBP13.64□□□□□ -0.23
CDH1-204ENST00000562118 HNRNPDQ14103 355 aaKnown RBP13.64□□□□□ -0.23
CDH1-204ENST00000562118 TFDP2Q14188 446 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 PLK5Q496M5 336 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 PMS2CLQ68D20 193 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 HEATR6Q6AI08 1181 aaKnown RBP13.64□□□□□ -0.23
CDH1-204ENST00000562118 DSG4Q86SJ6 1040 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 KBTBD6Q86V97 674 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 ATPAF2Q8N5M1 289 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 CHST14Q8NCH0 376 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 TRIM58Q8NG06 486 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 ATOH1Q92858 354 aaPredicted RBP13.64□□□□□ -0.23
CDH1-204ENST00000562118 CCDC114Q96M63 670 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 ZNF830Q96NB3 372 aaPredicted RBP13.64□□□□□ -0.23
CDH1-204ENST00000562118 MGME1Q9BQP7 344 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 CPEB1Q9BZB8 566 aaKnown RBP13.64□□□□□ -0.23
CDH1-204ENST00000562118 BRD8Q9H0E9 1235 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 PCED1AQ9H1Q7 454 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 DUSP15Q9H1R2 295 aaPredicted RBP13.64□□□□□ -0.23
CDH1-204ENST00000562118 SERGEFQ9UGK8 458 aa13.64□□□□□ -0.23
CDH1-204ENST00000562118 TSPAN11A1L157 253 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 APOC4-APOC2K7ER74 178 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 MUSKO15146 869 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 MATN3O15232 486 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 MID1O15344 667 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 SLC7A4O43246 635 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 RNASEH1O60930 286 aaKnown RBP13.63□□□□□ -0.23
CDH1-204ENST00000562118 APOC2P02655 101 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 PRNPP04156 253 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 KRT10P13645 584 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 OXTRP30559 389 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 HSPA9P38646 679 aaKnown RBP13.63□□□□□ -0.23
CDH1-204ENST00000562118 RGRP47804 291 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 SNRPD1P62314 119 aaKnown RBP13.63□□□□□ -0.23
CDH1-204ENST00000562118 IFI35P80217 286 aaPredicted RBP13.63□□□□□ -0.23
CDH1-204ENST00000562118 SLC10A7Q0GE19 358 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 SRSF5Q13243 272 aaKnown RBP13.63□□□□□ -0.23
CDH1-204ENST00000562118 LBRQ14739 615 aaKnown RBP13.63□□□□□ -0.23
CDH1-204ENST00000562118 PRKD1Q15139 912 aaPredicted RBP13.63□□□□□ -0.23
CDH1-204ENST00000562118 ACCSLQ4AC99 568 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 RALGPS1Q5JS13 557 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 AGBL4Q5VU57 503 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 PEAR1Q5VY43 1037 aaPredicted RBP13.63□□□□□ -0.23
CDH1-204ENST00000562118 TIGD7Q6NT04 549 aaPredicted RBP13.63□□□□□ -0.23
CDH1-204ENST00000562118 MMAAQ8IVH4 418 aaKnown RBP13.63□□□□□ -0.23
CDH1-204ENST00000562118 PGBD5Q8N414 524 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 UBL4BQ8N7F7 174 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 FRMD1Q8N878 549 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 PIP4K2CQ8TBX8 421 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 HCAR2Q8TDS4 363 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 LOXL4Q96JB6 756 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 SPACA7Q96KW9 195 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 NSMCE3Q96MG7 304 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 GDAP1L1Q96MZ0 367 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 HEPHQ9BQS7 1158 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 HDAC8Q9BY41 377 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 TNKS2Q9H2K2 1166 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 SP110Q9HB58 689 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 LZTFL1Q9NQ48 299 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 BCCIPQ9P287 314 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDH1-204ENST00000562118 SEPT3Q9UH03 358 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 IL36AQ9UHA7 158 aa13.63□□□□□ -0.23
CDH1-204ENST00000562118 PACSIN2Q9UNF0 486 aaPredicted RBP13.63□□□□□ -0.23
CDH1-204ENST00000562118 ZBTB24O43167 697 aaPredicted RBP13.62□□□□□ -0.23
CDH1-204ENST00000562118 ZSCAN12O43309 604 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 CST8O60676 142 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 LEFTY1O75610 366 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 POP4O95707 220 aaKnown RBP13.62□□□□□ -0.23
CDH1-204ENST00000562118 DNTTP04053 509 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 PECAM1P16284 738 aaPredicted RBP13.62□□□□□ -0.23
CDH1-204ENST00000562118 ITGB7P26010 798 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 CD6P30203 668 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 SLC8A1P32418 973 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 METAP1P53582 386 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 GRM3Q14832 879 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 NOMO1Q15155 1222 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 MYLK3Q32MK0 819 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 TTC31Q49AM3 519 aaPredicted RBP13.62□□□□□ -0.23
CDH1-204ENST00000562118 PIP5KL1Q5T9C9 394 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 FAM46CQ5VWP2 391 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 KIAA1324Q6UXG2 1013 aaKnown RBP13.62□□□□□ -0.23
CDH1-204ENST00000562118 SLC36A4Q6YBV0 504 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 LEKR1Q6ZMV7 388 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 TSEN2Q8NCE0 465 aaKnown RBP13.62□□□□□ -0.23
CDH1-204ENST00000562118 CADM4Q8NFZ8 388 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms