RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 SRGAP2BP0DMP2 458 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 SLC2A3P11169 496 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 OR1D2P34982 312 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 ARPP19P56211 112 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 ELF3P78545 371 aaPredicted RBP11.81□□□□□ -0.52
PCAT1-202ENST00000561978 RIPK1Q13546 671 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 BMPR2Q13873 1038 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 SNCBQ16143 134 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 DUSP6Q16828 381 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 INSCQ1MX18 579 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 KCTD11Q693B1 232 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 NAPEPLDQ6IQ20 393 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 RWDD4Q6NW29 188 aaKnown RBP11.81□□□□□ -0.52
PCAT1-202ENST00000561978 ANKS3Q6ZW76 656 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 TBC1D1Q86TI0 1168 aaPredicted RBP11.81□□□□□ -0.52
PCAT1-202ENST00000561978 TMEM135Q86UB9 458 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 MON1AQ86VX9 555 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 NUDCD3Q8IVD9 361 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 NPWQ8N729 165 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 NETO2Q8NC67 525 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 SCAMP5Q8TAC9 235 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 ERP27Q96DN0 273 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 AGAP3Q96P47 875 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 RAB3IPQ96QF0 476 aaPredicted RBP11.81□□□□□ -0.52
PCAT1-202ENST00000561978 TMEM209Q96SK2 561 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 IL22Q9GZX6 179 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 ZCWPW1Q9H0M4 648 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 MYLK2Q9H1R3 596 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 UGT1A7Q9HAW7 530 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 UGT1A10Q9HAW8 530 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 UGT1A8Q9HAW9 530 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 SAR1AQ9NR31 198 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 FNIP2Q9P278 1114 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 CHKBQ9Y259 395 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 HMX2A2RU54 273 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 GLRA3O75311 464 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 GLP2RO95838 553 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 ADH1AP07327 375 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 EPCAMP16422 314 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 BGNP21810 368 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 HOXC13P31276 330 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 GP5P40197 560 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 ARFIP2P53365 341 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 CRADDP78560 199 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 PDE1BQ01064 536 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 NRG1Q02297 640 aaPredicted RBP11.81□□□□□ -0.52
PCAT1-202ENST00000561978 CDK18Q07002 472 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 CTXN3Q4LDR2 81 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 SLC39A12Q504Y0 691 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 ASRGL1Q7L266 308 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 NLRP9Q7RTR0 991 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 TP53INP2Q8IXH6 220 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 NUP93Q8N1F7 819 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.81□□□□□ -0.52
PCAT1-202ENST00000561978 OR52K1Q8NGK4 314 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 KCNV2Q8TDN2 545 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 PTPRN2Q92932 1015 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 E2F7Q96AV8 911 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 TBC1D31Q96DN5 1066 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 THOC1Q96FV9 657 aaKnown RBP11.81□□□□□ -0.52
PCAT1-202ENST00000561978 CERS2Q96G23 380 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 C8orf48Q96LL4 319 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 C7orf26Q96N11 449 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 SERPINB11Q96P15 392 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 SIK2Q9H0K1 926 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 C12orf65Q9H3J6 166 aaKnown RBP11.81□□□□□ -0.52
PCAT1-202ENST00000561978 PCMTD2Q9NV79 361 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 SIRPGQ9P1W8 387 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 MTRRQ9UBK8 725 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 SCML2Q9UQR0 700 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 SSX2IPQ9Y2D8 614 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 ZNF638Q14966 1978 aaKnown RBP11.81□□□□□ -0.52
PCAT1-202ENST00000561978 TTC28Q96AY4 2481 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 PTPRDP23468 1912 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 FAM237BA0A1B0GVD1 139 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 H3BQ06 376 aaPredicted RBP11.8□□□□□ -0.52
PCAT1-202ENST00000561978 CACNG3O60359 315 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 ANXA9O76027 345 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 JCHAINP01591 159 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 OR4Q2P0C623 313 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 CD68P34810 354 aaPredicted RBP11.8□□□□□ -0.52
PCAT1-202ENST00000561978 SPRP35270 261 aaPredicted RBP11.8□□□□□ -0.52
PCAT1-202ENST00000561978 CLCN4P51793 760 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 CDH17Q12864 832 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 MRPL58Q14197 206 aaKnown RBP11.8□□□□□ -0.52
PCAT1-202ENST00000561978 TIGD7Q6NT04 549 aaPredicted RBP11.8□□□□□ -0.52
PCAT1-202ENST00000561978 CDHR3Q6ZTQ4 885 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 RASSF3Q86WH2 238 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 SCN4BQ8IWT1 228 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 ATPAF2Q8N5M1 289 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 STKLD1Q8NE28 680 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 ARMC2Q8NEN0 867 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 MAGEC3Q8TD91 643 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 INPP5DQ92835 1189 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 C1orf74Q96LT6 269 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 TRIM56Q9BRZ2 755 aaKnown RBP11.8□□□□□ -0.52
PCAT1-202ENST00000561978 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.8□□□□□ -0.52
PCAT1-202ENST00000561978 ZFP69BQ9UJL9 534 aa11.8□□□□□ -0.52
PCAT1-202ENST00000561978 MTCL1Q9Y4B5 1905 aaKnown RBP11.8□□□□□ -0.52
PCAT1-202ENST00000561978 CHUKO15111 745 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms