RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CAMK1Q14012 370 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 IHHQ14623 411 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 ZRSR2Q15696 482 aaKnown RBP6.66□□□□□ -1.34
CAPN3-210ENST00000561817 DNAJC21Q5F1R6 531 aaKnown RBP6.66□□□□□ -1.34
CAPN3-210ENST00000561817 TTC39BQ5VTQ0 682 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-210ENST00000561817 ICE2Q659A1 982 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 RAP1GAP2Q684P5 730 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 NUGGCQ68CJ6 796 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 DENND5AQ6IQ26 1287 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 UNC5AQ6ZN44 842 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 C3orf62Q6ZUJ4 267 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 SH2D5Q6ZV89 423 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 PID1Q7Z2X4 250 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 SPRED2Q7Z698 418 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 TADA2BQ86TJ2 420 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 TRABD2AQ86V40 505 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 TEX26Q8N6G2 289 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 SPPL3Q8TCT6 385 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 TADA1Q96BN2 335 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 CENPTQ96BT3 561 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 PLD4Q96BZ4 506 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 HMCESQ96FZ2 354 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 PRICKLE1Q96MT3 831 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-210ENST00000561817 KLHL5Q96PQ7 755 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 XPO6Q96QU8 1125 aaKnown RBP6.66□□□□□ -1.34
CAPN3-210ENST00000561817 FCRL5Q96RD9 977 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 SLC22A12Q96S37 553 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 TRIM56Q9BRZ2 755 aaKnown RBP6.66□□□□□ -1.34
CAPN3-210ENST00000561817 NKX2-4Q9H2Z4 354 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 CENPHQ9H3R5 247 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 RETREG1Q9H6L5 497 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 CERS4Q9HA82 394 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 PPCSQ9HAB8 311 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 GLOD4Q9HC38 313 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 SMYD2Q9NRG4 433 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 MOCS1Q9NZB8 636 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 TRPM5Q9NZQ8 1165 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 SEPT10Q9P0V9 454 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 LZTS1Q9Y250 596 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 INSL6Q9Y581 213 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 PCDHB12Q9Y5F1 795 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 ACTL7BQ9Y614 415 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 MTCL1Q9Y4B5 1905 aaKnown RBP6.66□□□□□ -1.34
CAPN3-210ENST00000561817 NOTCH4Q99466 2003 aa6.66□□□□□ -1.34
CAPN3-210ENST00000561817 EXOC1LA0A1B0GW35 172 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 LINC01553A4QN01 128 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 C2orf71A6NGG8 1288 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 FAM159BA6NKW6 160 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 ERI2A8K979 691 aaKnown RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 HIDE1A8MVS5 230 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 CXorf49A8MYA2 514 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 RASA4BC9J798 803 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 C5orf67F2Z3F1 127 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 F5H423 210 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 J3KR12 359 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 DFFAO00273 331 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 SOX1O00570 391 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 TRDMT1O14717 391 aaKnown RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 RASA4O43374 803 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 PIAS1O75925 651 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 CXCL14O95715 111 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 HLA-DQB2P05538 268 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 IVLP07476 585 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 MMP2P08253 660 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 CCNB1P14635 433 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 HOXD9P28356 352 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 HPDP32754 393 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 BMP8BP34820 402 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 MAPKAPK2P49137 400 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 LMAN1P49257 510 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 SGSHP51688 502 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 GEMIN4P57678 1058 aaKnown RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 GUCY1A3Q02108 690 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 MSLNQ13421 630 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 FRG1Q14331 258 aaKnown RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 SPARCL1Q14515 664 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 HABP4Q5JVS0 413 aaKnown RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 RNF43Q68DV7 783 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 TRMT10BQ6PF06 316 aaKnown RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 KDELC1Q6UW63 502 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 LRRC31Q6UY01 552 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 CAPN12Q6ZSI9 719 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 GAREM2Q75VX8 874 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 OTOP3Q7RTS5 596 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 PRICKLE2Q7Z3G6 844 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 TFAP2DQ7Z6R9 452 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 CIR1Q86X95 450 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 FAM217AQ8IXS0 508 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 PALM2Q8IXS6 379 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 ATPAF2Q8N5M1 289 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 ARFGAP2Q8N6H7 521 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 MRPL43Q8N983 215 aaKnown RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 OR52K2Q8NGK3 314 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 MDM1Q8TC05 714 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 DENND1AQ8TEH3 1009 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 SLC44A1Q8WWI5 657 aa6.65□□□□□ -1.34
CAPN3-210ENST00000561817 ATXN2LQ8WWM7 1075 aaKnown RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 ARHGEF2Q92974 986 aaKnown RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 ZNF512Q96ME7 567 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-210ENST00000561817 AGAP3Q96P47 875 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms