RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, human

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERC1-215	ENST00000561436	MAATS1	Q7Z4T9	603 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	TSPYL6	Q8N831	410 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	HTRA1	Q92743	480 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	STAM	Q92783	540 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	SKA1	Q96BD8	255 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	REPS1	Q96D71	796 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	ZNF845	Q96IR2	970 aa	Predicted RBP	4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	CLPB	Q9H078	707 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	NUAK2	Q9H093	628 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	ALKBH4	Q9NXW9	302 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	CNOT7	Q9UIV1	285 aa	Known RBP	4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	HACL1	Q9UJ83	578 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	PNMA2	Q9UL42	364 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	ARHGAP26	Q9UNA1	814 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	SLC8A2	Q9UPR5	921 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	RGPD8	O14715	1765 aa	Predicted RBP	4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	CARMIL3	Q8ND23	1372 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	CGB1	A6NKQ9	187 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	SYN3	O14994	580 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	MBD4	O95243	580 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	METTL18	O95568	372 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	MBP	P02686	304 aa	Predicted RBP	4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	HSPA8	P11142	646 aa	Known RBP	4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	IGFBP2	P18065	325 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	TGM2	P21980	687 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	FBL	P22087	321 aa	Known RBP	4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	PRKCH	P24723	683 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	GSTM2	P28161	218 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	TACR3	P29371	465 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	MPG	P29372	298 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	ABCG1	P45844	678 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	RPS6KA3	P51812	740 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	CDK18	Q07002	472 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	SRSF4	Q08170	494 aa	Known RBP	4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	LMOD3	Q0VAK6	560 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	GPR68	Q15743	365 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	WDR45B	Q5MNZ6	344 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	WDR78	Q5VTH9	848 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	FCRLB	Q6BAA4	426 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	USP50	Q70EL3	339 aa	Predicted RBP	4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	SMIM5	Q71RC9	77 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	CNTROB	Q8N137	903 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	GPC2	Q8N158	579 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	PCYOX1L	Q8NBM8	494 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	LINS1	Q8NG48	757 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	KCNJ9	Q92806	393 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	KAT2B	Q92831	832 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	CD180	Q99467	661 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	TRIM31	Q9BZY9	425 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	RMI1	Q9H9A7	625 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	TMEM160	Q9NX00	188 aa		4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	IPO11	Q9UI26	975 aa	Known RBP	4.06	□□□□□ -1.76
HERC1-215	ENST00000561436	EMSY	Q7Z589	1322 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	CDHR2	Q9BYE9	1310 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	CLSPN	Q9HAW4	1339 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	TMEM247	A6NEH6	219 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	EYA2	O00167	538 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	TSPAN4	O14817	238 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	RNMT	O43148	476 aa	Known RBP	4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	HBP1	O60381	514 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	DDN	O94850	711 aa	Predicted RBP	4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	CSF1	P09603	554 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	ALDOC	P09972	364 aa	Known RBP	4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	CYP4B1	P13584	511 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	AKR1A1	P14550	325 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	EPHX2	P34913	555 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	ARL1	P40616	181 aa	Predicted RBP	4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	STAT1	P42224	750 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	STAT6	P42226	847 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	CASP2	P42575	452 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	LIFR	P42702	1097 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	PAFAH1B1	P43034	410 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	CCR5	P51681	352 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	LBX1	P52954	281 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	SLC37A1	P57057	533 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	GEMIN4	P57678	1058 aa	Known RBP	4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	KPNB1	Q14974	876 aa	Known RBP	4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	ANXA2R	Q3ZCQ2	193 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	GXYLT1	Q4G148	440 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	LRRC24	Q50LG9	513 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	ZKSCAN2	Q63HK3	967 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	RANBP10	Q6VN20	620 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	ZNF66	Q6ZN08	573 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	HEATR4	Q86WZ0	1026 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	TTC5	Q8N0Z6	440 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	PNLDC1	Q8NA58	520 aa	Known RBP	4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	CNBD1	Q8NA66	436 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	FAM47B	Q8NA70	645 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	CLEC4C	Q8WTT0	213 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	NCSTN	Q92542	709 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	HDAC2	Q92769	488 aa	Known RBP	4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	NELL1	Q92832	810 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	GPR78	Q96P69	363 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	THAP1	Q9NVV9	213 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	ASIC5	Q9NY37	505 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	GGA3	Q9NZ52	723 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	B3GNT3	Q9Y2A9	372 aa		4.05	□□□□□ -1.76
HERC1-215	ENST00000561436	TNFRSF18	Q9Y5U5	241 aa		4.05	□□□□□ -1.76

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