RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ITKQ08881 620 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 NIPAL4Q0D2K0 466 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 OLIG2Q13516 323 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 TEAD2Q15562 447 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 RAB30Q15771 203 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 PCID2Q5JVF3 399 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 PRSS36Q5K4E3 855 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 DENND5AQ6IQ26 1287 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 MARK2Q7KZI7 788 aaKnown RBP17.38■□□□□ 0.37
HDDC3-206ENST00000561036 CTAGE3PQ8IX95 158 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 SRRM1Q8IYB3 904 aaKnown RBP17.38■□□□□ 0.37
HDDC3-206ENST00000561036 PPM1NQ8N819 430 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 TDRD5Q8NAT2 981 aaKnown RBP17.38■□□□□ 0.37
HDDC3-206ENST00000561036 OR52K2Q8NGK3 314 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 ARRDC2Q8TBH0 407 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 ALKBH8Q96BT7 664 aaKnown RBP17.38■□□□□ 0.37
HDDC3-206ENST00000561036 MTBPQ96DY7 904 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 PSKH2Q96QS6 385 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 SELENOSQ9BQE4 189 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 MGME1Q9BQP7 344 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 KIFC1Q9BW19 673 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 MUC3BQ9H195 1237 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 TRABDQ9H4I3 376 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 SMG5Q9UPR3 1016 aaKnown RBP17.38■□□□□ 0.37
HDDC3-206ENST00000561036 RPS6KL1Q9Y6S9 549 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 FAM169AQ9Y6X4 670 aa17.38■□□□□ 0.37
HDDC3-206ENST00000561036 CXorf51AA0A1B0GTR3 108 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.37■□□□□ 0.37
HDDC3-206ENST00000561036 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.37■□□□□ 0.37
HDDC3-206ENST00000561036 KRT37O76014 449 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 EPOP01588 193 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 MMP2P08253 660 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 GJA1P17302 382 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 CD86P42081 329 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 MGAT5Q09328 741 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 ANKRD20A4Q4UJ75 823 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 CERCAMQ5T4B2 595 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 STXBP5Q5T5C0 1151 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 TRMT10BQ6PF06 316 aaKnown RBP17.37■□□□□ 0.37
HDDC3-206ENST00000561036 PGBD5Q8N414 524 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 CARNMT1Q8N4J0 409 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 KIAA1958Q8N8K9 716 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.37■□□□□ 0.37
HDDC3-206ENST00000561036 MZB1Q8WU39 189 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 TCEAL4Q96EI5 215 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 SMC6Q96SB8 1091 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 APOL2Q9BQE5 337 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 PIH1D1Q9NWS0 290 aaKnown RBP17.37■□□□□ 0.37
HDDC3-206ENST00000561036 MSRAQ9UJ68 235 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 HCFC2Q9Y5Z7 792 aa17.37■□□□□ 0.37
HDDC3-206ENST00000561036 CXorf49A8MYA2 514 aaPredicted RBP17.36■□□□□ 0.37
HDDC3-206ENST00000561036 PRPF4O43172 522 aaKnown RBP eCLIP17.36■□□□□ 0.37
HDDC3-206ENST00000561036 KRT38O76015 456 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 CYBBP04839 570 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 SNRPAP09012 282 aaKnown RBP17.36■□□□□ 0.37
HDDC3-206ENST00000561036 CHN1P15882 459 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 WEE1P30291 646 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 GBP2P32456 591 aaPredicted RBP17.36■□□□□ 0.37
HDDC3-206ENST00000561036 GUCY1A3Q02108 690 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 DSC2Q02487 901 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 CDH18Q13634 790 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 DUSP6Q16828 381 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 PKN3Q6P5Z2 889 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 BBS7Q8IWZ6 715 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 PPHLN1Q8NEY8 458 aaKnown RBP17.36■□□□□ 0.37
HDDC3-206ENST00000561036 SH3RF2Q8TEC5 729 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 ZNF707Q96C28 371 aaPredicted RBP17.36■□□□□ 0.37
HDDC3-206ENST00000561036 MRRFQ96E11 262 aaKnown RBP17.36■□□□□ 0.37
HDDC3-206ENST00000561036 CERS2Q96G23 380 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 FEM1CQ96JP0 617 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 RANBP9Q96S59 729 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 CDCA3Q99618 268 aaPredicted RBP17.36■□□□□ 0.37
HDDC3-206ENST00000561036 FEM1AQ9BSK4 669 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 CINPQ9BW66 212 aaPredicted RBP17.36■□□□□ 0.37
HDDC3-206ENST00000561036 TLE6Q9H808 572 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 SMYD2Q9NRG4 433 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 INTS9Q9NV88 658 aaKnown RBP17.36■□□□□ 0.37
HDDC3-206ENST00000561036 OR51B4Q9Y5P0 310 aa17.36■□□□□ 0.37
HDDC3-206ENST00000561036 HELZP42694 1942 aaKnown RBP17.36■□□□□ 0.37
HDDC3-206ENST00000561036 GBF1Q92538 1859 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 CCDC195A0A1B0GUA6 201 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 LOC285095A0A1B0GVY8 99 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 TMEM120BA0PK00 339 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 NRG2O14511 850 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-206ENST00000561036 ATP9BO43861 1147 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 ZMPSTE24O75844 475 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 MT-ND3P03897 115 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 ADRA1DP25100 572 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 LSP1P33241 339 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 MAXP61244 160 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 DNAJC3Q13217 504 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 SLC12A1Q13621 1099 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 INO80DQ53TQ3 878 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-206ENST00000561036 RALGPS1Q5JS13 557 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 FYB2Q5VWT5 728 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 MFN1Q8IWA4 741 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.35■□□□□ 0.37
HDDC3-206ENST00000561036 ZNF557Q8N988 423 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-206ENST00000561036 DCAF4L2Q8NA75 395 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 FIBINQ8TAL6 211 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms