RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 LVRNQ6Q4G3 990 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 CCDC73Q6ZRK6 1079 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 TIPARPQ7Z3E1 657 aaKnown RBP9.76□□□□□ -0.85
HERC1-210ENST00000560897 CHSY1Q86X52 802 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 GKN2Q86XP6 184 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 NELFCDQ8IXH7 590 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 LGI2Q8N0V4 545 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 PRR7Q8TB68 274 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 MARVELD3Q96A59 401 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 NUCKS1Q9H1E3 243 aaKnown RBP9.76□□□□□ -0.85
HERC1-210ENST00000560897 TCEAL2Q9H3H9 227 aaPredicted RBP9.76□□□□□ -0.85
HERC1-210ENST00000560897 RUBCNLQ9H714 662 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 TFIP11Q9UBB9 837 aaKnown RBP9.76□□□□□ -0.85
HERC1-210ENST00000560897 NAALADL1Q9UQQ1 740 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 KCTD3Q9Y597 815 aa9.76□□□□□ -0.85
HERC1-210ENST00000560897 OTOGQ6ZRI0 2925 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 RAD51BO15315 384 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 ATP9BO43861 1147 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 IGLV3-27P01718 113 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 APOEP02649 317 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 TCN2P20062 427 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 CHRNA3P32297 505 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 NEK3P51956 506 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 CENPCQ03188 943 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 ARHGEF7Q14155 803 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 EIF2S3LQ2VIR3 472 aaKnown RBP9.75□□□□□ -0.85
HERC1-210ENST00000560897 CEP135Q66GS9 1140 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 MSANTD2Q6P1R3 559 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 ANKRD52Q8NB46 1076 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 DENND6BQ8NEG7 585 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 TMIEQ8NEW7 156 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 PARD3BQ8TEW8 1205 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 PDCD6IPQ8WUM4 868 aaKnown RBP9.75□□□□□ -0.85
HERC1-210ENST00000560897 ZSCAN31Q96LW9 406 aaPredicted RBP9.75□□□□□ -0.85
HERC1-210ENST00000560897 C5orf34Q96MH7 638 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 SERPINB11Q96P15 392 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 LRRC27Q9C0I9 530 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 MAP10Q9P2G4 905 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 CGNQ9P2M7 1197 aaKnown RBP9.75□□□□□ -0.85
HERC1-210ENST00000560897 HESX1Q9UBX0 185 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 PCDHGA3Q9Y5H0 932 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 NAV3Q8IVL0 2385 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 MED13LQ71F56 2210 aa9.75□□□□□ -0.85
HERC1-210ENST00000560897 SVILO95425 2214 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 ARHGAP10A1A4S6 786 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 YJEFN3A6XGL0 299 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 E7ENQ6 273 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 F5H5T6 163 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 NEMP1O14524 444 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 HGSO14964 777 aaPredicted RBP9.74□□□□□ -0.85
HERC1-210ENST00000560897 XPO1O14980 1071 aaKnown RBP9.74□□□□□ -0.85
HERC1-210ENST00000560897 ZW10O43264 779 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 TGFB1I1O43294 461 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 HLA-DRAP01903 254 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 CTSLP07711 333 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 CCL4P13236 92 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 GLB1P16278 677 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 PDCP20941 246 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 OAS2P29728 719 aaKnown RBP9.74□□□□□ -0.85
HERC1-210ENST00000560897 C16orf72Q14CZ0 275 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 TCEA2Q15560 299 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 ZACNQ401N2 412 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 EFHC2Q5JST6 749 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 TPRG1LQ5T0D9 272 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 MACC1Q6ZN28 852 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 PIM3Q86V86 326 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 SLITRK4Q8IW52 837 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 TTC39CQ8N584 583 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 TTC13Q8NBP0 860 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 ZNF507Q8TCN5 953 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 GRIN3AQ8TCU5 1115 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 KCTD13Q8WZ19 329 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 STARD8Q92502 1023 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 MYEOVQ96EZ4 313 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 LENG8Q96PV6 779 aaPredicted RBP9.74□□□□□ -0.85
HERC1-210ENST00000560897 HDAC8Q9BY41 377 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 ASPSCR1Q9BZE9 553 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 NIF3L1Q9GZT8 377 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 CLPBQ9H078 707 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 CNGB3Q9NQW8 809 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 VPS28Q9UK41 221 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 APPL1Q9UKG1 709 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 PCDHB3Q9Y5E6 796 aa9.74□□□□□ -0.85
HERC1-210ENST00000560897 SHANK1Q9Y566 2161 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 RFPL1O75677 317 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 LDLRP01130 860 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 CELA2BP08218 269 aaPredicted RBP9.73□□□□□ -0.85
HERC1-210ENST00000560897 LCP1P13796 627 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 PNLIPP16233 465 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 MAP4P27816 1152 aaKnown RBP9.73□□□□□ -0.85
HERC1-210ENST00000560897 HOXD13P35453 343 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 PFN3P60673 137 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 CLDN10P78369 228 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 BST2Q10589 180 aaKnown RBP9.73□□□□□ -0.85
HERC1-210ENST00000560897 ARHGAP44Q17R89 818 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 GOLGA7BQ2TAP0 167 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 FAM26FQ5R3K3 315 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 TTC39BQ5VTQ0 682 aaPredicted RBP9.73□□□□□ -0.85
HERC1-210ENST00000560897 RAP1GAP2Q684P5 730 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 BHLHA9Q7RTU4 235 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms