RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 PYROXD2Q8N2H3 581 aa10.42□□□□□ -0.74
LDLR-214ENST00000560628 GALNT15Q8N3T1 639 aa10.42□□□□□ -0.74
LDLR-214ENST00000560628 AOPEPQ8N6M6 819 aa10.42□□□□□ -0.74
LDLR-214ENST00000560628 PCDH20Q8N6Y1 951 aaKnown RBP10.42□□□□□ -0.74
LDLR-214ENST00000560628 NETO2Q8NC67 525 aa10.42□□□□□ -0.74
LDLR-214ENST00000560628 ERGIC2Q96RQ1 377 aa10.42□□□□□ -0.74
LDLR-214ENST00000560628 HDAC8Q9BY41 377 aa10.42□□□□□ -0.74
LDLR-214ENST00000560628 CEP44Q9C0F1 390 aa10.42□□□□□ -0.74
LDLR-214ENST00000560628 ZDHHC6Q9H6R6 413 aa10.42□□□□□ -0.74
LDLR-214ENST00000560628 DAAM1Q9Y4D1 1078 aa10.42□□□□□ -0.74
LDLR-214ENST00000560628 PLXNB3Q9ULL4 1909 aa10.42□□□□□ -0.74
LDLR-214ENST00000560628 GOLGA4Q13439 2230 aaKnown RBP10.42□□□□□ -0.74
LDLR-214ENST00000560628 IGF2RP11717 2491 aa10.42□□□□□ -0.74
LDLR-214ENST00000560628 AKAP13Q12802 2813 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 TEX33O43247 280 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 MAGEC1O60732 1142 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 PAK4O96013 591 aaPredicted RBP10.41□□□□□ -0.74
LDLR-214ENST00000560628 CALB1P05937 261 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 ADRB3P13945 408 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 JUPP14923 745 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 HNRNPA2B1P22626 353 aaKnown RBP10.41□□□□□ -0.74
LDLR-214ENST00000560628 AKT2P31751 481 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 L1CAMP32004 1257 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 NEK3P51956 506 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 RPL7AP62424 266 aaKnown RBP10.41□□□□□ -0.74
LDLR-214ENST00000560628 NRG1Q02297 640 aaPredicted RBP10.41□□□□□ -0.74
LDLR-214ENST00000560628 TYRO3Q06418 890 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 CYP4F3Q08477 520 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 OVGP1Q12889 678 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 POLD3Q15054 466 aaPredicted RBP10.41□□□□□ -0.74
LDLR-214ENST00000560628 SMAD1Q15797 465 aaKnown RBP10.41□□□□□ -0.74
LDLR-214ENST00000560628 ZNF542PQ5EBM4 170 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 ACAD10Q6JQN1 1059 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 DNAJC24Q6P3W2 148 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 C19orf48Q6RUI8 117 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 MON1BQ7L1V2 547 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 KANSL1Q7Z3B3 1105 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 SLFN11Q7Z7L1 901 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 ZNF354CQ86Y25 554 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 OXR1Q8N573 874 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 TMEM145Q8NBT3 493 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 C3orf20Q8ND61 904 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 OR13H1Q8NG92 308 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 TBC1D31Q96DN5 1066 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 PPP1R16AQ96I34 528 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 FEM1CQ96JP0 617 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 CALN1Q9BXU9 219 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 MAGEH1Q9H213 219 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 TMEM248Q9NWD8 314 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 HPCAL4Q9UM19 191 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 FADS3Q9Y5Q0 445 aa10.41□□□□□ -0.74
LDLR-214ENST00000560628 TCRBV5S1A1TA0A578 114 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 IGLON5A6NGN9 336 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 C16orf96A6NNT2 1141 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 TMCO5BA8MYB1 307 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 KRIT1O00522 736 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 TRIM38O00635 465 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 RAD51BO15315 384 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 CCP110O43303 1012 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 BUB1O43683 1085 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 KDELR3O43731 214 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 CREB3O43889 395 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 RAMP2O60895 175 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 RFPL3O75679 317 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 TNFAIP3P21580 790 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 ITGB7P26010 798 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 EPHB2P29323 1055 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 ETFBP38117 255 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 MAPKAPK2P49137 400 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 ZNF143P52747 638 aaPredicted RBP10.4□□□□□ -0.74
LDLR-214ENST00000560628 GSCP56915 257 aaPredicted RBP10.4□□□□□ -0.74
LDLR-214ENST00000560628 RPS21P63220 83 aaKnown RBP10.4□□□□□ -0.74
LDLR-214ENST00000560628 C1QBPQ07021 282 aaKnown RBP10.4□□□□□ -0.74
LDLR-214ENST00000560628 FGL2Q14314 439 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 MYLK3Q32MK0 819 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 ANO6Q4KMQ2 910 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 EFHC2Q5JST6 749 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 ATXN7L2Q5T6C5 722 aaPredicted RBP10.4□□□□□ -0.74
LDLR-214ENST00000560628 SFMBT2Q5VUG0 894 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 Q6ZSR6 202 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 PARS2Q7L3T8 475 aaKnown RBP10.4□□□□□ -0.74
LDLR-214ENST00000560628 IRF2BP2Q7Z5L9 587 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 DNAAF5Q86Y56 855 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 MCOLN2Q8IZK6 566 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 SLC25A45Q8N413 288 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 TSC1Q92574 1164 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 NTAN1Q96AB6 310 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 ISG20Q96AZ6 181 aaKnown RBP10.4□□□□□ -0.74
LDLR-214ENST00000560628 BMFQ96LC9 184 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 MCEEQ96PE7 176 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 SLC17A9Q9BYT1 436 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 KLC2Q9H0B6 622 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 NOL6Q9H6R4 1146 aaKnown RBP10.4□□□□□ -0.74
LDLR-214ENST00000560628 KLHL11Q9NVR0 708 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 UCKL1Q9NWZ5 548 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 TAS2R14Q9NYV8 317 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 TMEM63CQ9P1W3 806 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 NEU3Q9UQ49 428 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 RAXQ9Y2V3 346 aa10.4□□□□□ -0.74
LDLR-214ENST00000560628 PCDHGA1Q9Y5H4 931 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms