RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 CENPCQ03188 943 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 CBWD6Q4V339 395 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 PRRT3Q5FWE3 981 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 CBWD3Q5JTY5 395 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 CBWD5Q5RIA9 395 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 RESP18Q5W5W9 173 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 KIAA1161Q6NSJ0 714 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 ATP6V0D2Q8N8Y2 350 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 BTN2A2Q8WVV5 523 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 FEM1CQ96JP0 617 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 LENG8Q96PV6 779 aaPredicted RBP9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 GFM1Q96RP9 751 aaKnown RBP9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 PPP1R9BQ96SB3 815 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 PSMB7Q99436 277 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 LRRC61Q9BV99 259 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 STRADBQ9C0K7 418 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 DYRK4Q9NR20 520 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 PPP4R2Q9NY27 417 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 KCNK4Q9NYG8 393 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 FOXJ2Q9P0K8 574 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 APOBEC3BQ9UH17 382 aaKnown RBP9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 VPS28Q9UK41 221 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 PCDHA7Q9UN72 937 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 MAPK8IP1Q9UQF2 711 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 HS3ST2Q9Y278 367 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 COQ4Q9Y3A0 265 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 FARP1Q9Y4F1 1045 aaPredicted RBP9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 FADS3Q9Y5Q0 445 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 WASF2Q9Y6W5 498 aa9.14□□□□□ -0.95
RABGGTA-217ENST00000560521 SHANK1Q9Y566 2161 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 C9orf172C9J069 976 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 M0QYV0 167 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 FPGTO14772 594 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 SNAP91O60641 907 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 ZNF821O75541 412 aaPredicted RBP9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 LEFTY1O75610 366 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 YEATS4O95619 227 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 PRNPP04156 253 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 ANXA6P08133 673 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 ADRB3P13945 408 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 TSHRP16473 764 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 RRM1P23921 792 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 NOS2P35228 1153 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 KCNAB2Q13303 367 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 NCAPHQ15003 741 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 TTC39BQ5VTQ0 682 aaPredicted RBP9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 ESRP1Q6NXG1 681 aaKnown RBP9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 TMEM270Q6UE05 265 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 BEND5Q7L4P6 421 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 CEP57L1Q8IYX8 460 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 PHACTR4Q8IZ21 702 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 SDR16C5Q8N3Y7 309 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 ATP11CQ8NB49 1132 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 GRIN3AQ8TCU5 1115 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 USP7Q93009 1102 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 RNF34Q969K3 372 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 CCDC74AQ96AQ1 378 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 FAM149B1Q96BN6 582 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 C1QTNF2Q9BXJ5 285 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 CPEB1Q9BZB8 566 aaKnown RBP9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 LRRN3Q9H3W5 708 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 LRRC4CQ9HCJ2 640 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 FAM13BQ9NYF5 915 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 GULP1Q9UBP9 304 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 IL36AQ9UHA7 158 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 TBC1D30Q9Y2I9 924 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 LOXL2Q9Y4K0 774 aa9.13□□□□□ -0.95
RABGGTA-217ENST00000560521 A0A1W2PQ27 194 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 A0A1W2PQ64 194 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 A0A1W2PQC6 194 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 IGLON5A6NGN9 336 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 ENO4A6NNW6 628 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 RPLP0P05388 317 aaKnown RBP9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 PAEPP09466 180 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 BRD2P25440 801 aaKnown RBP9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 RPL13P26373 211 aaKnown RBP9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 GPD2P43304 727 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 NEK3P51956 506 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 MAPK10P53779 464 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 POLE2P56282 527 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 YWHAEP62258 255 aaKnown RBP9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 ZFP36L1Q07352 338 aaKnown RBP9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 LRMPQ12912 555 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 AUHQ13825 339 aaKnown RBP9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 RABGAP1LQ5R372 815 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 FAXCQ5TGI0 409 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 BORAQ6PGQ7 559 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 DPY19L3Q6ZPD9 716 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 KYQ8NBH2 561 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 CENPTQ96BT3 561 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 TBATAQ96M53 351 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 CCDC114Q96M63 670 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 ZNF396Q96N95 335 aaPredicted RBP9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 TMEM74Q96NL1 305 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 RPRD1AQ96P16 312 aaPredicted RBP9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 SRRTQ9BXP5 876 aaKnown RBP9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 TNKS2Q9H2K2 1166 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 ST7Q9NRC1 585 aa9.12□□□□□ -0.95
RABGGTA-217ENST00000560521 SIRPGQ9P1W8 387 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms