RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 GAGE7O76087 117 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 DDAH2O95865 285 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 GAGE12FP0CL80 117 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 GAGE12GP0CL81 117 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 GAGE12IP0CL82 117 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 ZNF10P21506 573 aaPredicted RBP2.83□□□□□ -1.96
SPG11-222ENST00000560435 PRPH2P23942 346 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 HSD17B4P51659 736 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 CASP5P51878 434 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 ECT2LQ008S8 904 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 GAGE1Q13065 139 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 GAGE4Q13068 117 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 GALEQ14376 348 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 FAM69BQ5VUD6 431 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 NCAPH2Q6IBW4 605 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 TRIM74Q86UV6 250 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 TRIM73Q86UV7 250 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 SPAG16Q8N0X2 631 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 FAM76AQ8TAV0 307 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 GPT2Q8TD30 523 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 MSTO1Q9BUK6 570 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 IFT27Q9BW83 186 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 LHPPQ9H008 270 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 EPS8L2Q9H6S3 715 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 SMARCAL1Q9NZC9 954 aa2.83□□□□□ -1.96
SPG11-222ENST00000560435 IGKV6D-41A0A0C4DH26 115 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 DDTLA6NHG4 134 aaPredicted RBP2.82□□□□□ -1.96
SPG11-222ENST00000560435 CETPP11597 493 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 FCGR2AP12318 317 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 MARK3P27448 753 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 SSTR2P30874 369 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 CYP4A11Q02928 519 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 KRT72Q14CN4 511 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 SYT16Q17RD7 645 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 ZNF569Q5MCW4 686 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 ARL6IP4Q66PJ3 421 aaKnown RBP2.82□□□□□ -1.96
SPG11-222ENST00000560435 KLHL24Q6TFL4 600 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 ZNF497Q6ZNH5 498 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 WDR5BQ86VZ2 330 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 OR1N1Q8NGS0 311 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 LNX1Q8TBB1 728 aaPredicted RBP2.82□□□□□ -1.96
SPG11-222ENST00000560435 MOV10L1Q9BXT6 1211 aaKnown RBP2.82□□□□□ -1.96
SPG11-222ENST00000560435 HDHD5Q9BXW7 423 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 NPFFR1Q9GZQ6 430 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.82□□□□□ -1.96
SPG11-222ENST00000560435 FBRSL1Q9HCM7 1045 aaKnown RBP2.82□□□□□ -1.96
SPG11-222ENST00000560435 NECTIN3Q9NQS3 549 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 TMEM51Q9NW97 253 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 SLC25A13Q9UJS0 675 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 PHTF1Q9UMS5 762 aa2.82□□□□□ -1.96
SPG11-222ENST00000560435 THRAP3Q9Y2W1 955 aaKnown RBP2.82□□□□□ -1.96
SPG11-222ENST00000560435 CACNA1FO60840 1977 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 SLC38A8A6NNN8 435 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 VSTM5A8MXK1 200 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 KIF28PB7ZC32 967 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 RASA4BC9J798 803 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 SLC5A1P13866 664 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 ALDH4A1P30038 563 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 DCTDP32321 178 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 STT3AP46977 705 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 CLCN3P51790 818 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 RNASELQ05823 741 aaKnown RBP2.81□□□□□ -1.96
SPG11-222ENST00000560435 LPAL2Q16609 132 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 ARHGAP11AQ6P4F7 1023 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 FBXO38Q6PIJ6 1188 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 TMC8Q8IU68 726 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 RAVER1Q8IY67 606 aaKnown RBP2.81□□□□□ -1.96
SPG11-222ENST00000560435 TXLNBQ8N3L3 684 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 AADATQ8N5Z0 425 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 DDX23Q9BUQ8 820 aaKnown RBP2.81□□□□□ -1.96
SPG11-222ENST00000560435 MECRQ9BV79 373 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 PTPRHQ9HD43 1115 aa2.81□□□□□ -1.96
SPG11-222ENST00000560435 HERC5Q9UII4 1024 aaKnown RBP2.81□□□□□ -1.96
SPG11-222ENST00000560435 A0A1W2PNU3 283 aaPredicted RBP2.8□□□□□ -1.96
SPG11-222ENST00000560435 C16orf97H3BN30 126 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 CHL1O00533 1208 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 KDM4BO94953 1096 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 LARGE1O95461 756 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 VNN2O95498 520 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 MCM3P25205 808 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 KLRK1P26718 216 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 GSTM2P28161 218 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 LIFRP42702 1097 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 RCAN1P53805 252 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 ALDH18A1P54886 795 aaKnown RBP2.8□□□□□ -1.96
SPG11-222ENST00000560435 ANAPC15P60006 121 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 LMO4P61968 165 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 SF3A3Q12874 501 aaKnown RBP eCLIP2.8□□□□□ -1.96
SPG11-222ENST00000560435 PPIGQ13427 754 aaKnown RBP eCLIP2.8□□□□□ -1.96
SPG11-222ENST00000560435 TNFAIP1Q13829 316 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 PPP2R5AQ15172 486 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 NFE2Q16621 373 aaPredicted RBP2.8□□□□□ -1.96
SPG11-222ENST00000560435 ARL13BQ3SXY8 428 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 NAPEPLDQ6IQ20 393 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 RINT1Q6NUQ1 792 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 MTFR2Q6P444 385 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 SFR1Q86XK3 245 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 STT3BQ8TCJ2 826 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 TEFMQ96QE5 360 aaKnown RBP2.8□□□□□ -1.96
SPG11-222ENST00000560435 F2RL3Q96RI0 385 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms