RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ATXN10Q9UBB4 475 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 MRTO4Q9UKD2 239 aaKnown RBP14□□□□□ -0.17
CSPG4P12-202ENST00000559989 AGRPO00253 132 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 PPEF2O14830 753 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 CST1P01037 141 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 CYP17A1P05093 508 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 CDK16Q00536 496 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 PAPD7Q5XG87 772 aaKnown RBP14□□□□□ -0.17
CSPG4P12-202ENST00000559989 AFTPHQ6ULP2 937 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 PLEKHF1Q96S99 279 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 MKNK1Q9BUB5 465 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 TRIM9Q9C026 710 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 PCDHA3Q9Y5H8 950 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 ZNF780BQ9Y6R6 833 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 PLK4O00444 970 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 DNTTP04053 509 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 OR10H1Q9Y4A9 318 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 GLRA4Q5JXX5 417 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 SPAG4Q9NPE6 437 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 PMF1-BGLAPU3KQ54 211 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 MAFKO60675 156 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 ENPEPQ07075 957 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 SHC4Q6S5L8 630 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 SPERTQ8NA61 448 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 DPP7Q9UHL4 492 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 CARD8Q9Y2G2 431 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 F5H6K3 240 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 L7N2F9 121 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 M0R036 132 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 KCNA5P22460 613 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 PRKAG1P54619 331 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 VAMP2P63027 116 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 MBTD1Q05BQ5 628 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 KLRC3Q07444 240 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 POU6F1Q14863 301 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 SLCO6A1Q86UG4 719 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 SNX32Q86XE0 403 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 SOHLH2Q9NX45 425 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 PRR12Q9ULL5 1215 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 PCDHGC5Q9Y5F6 944 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 AK5Q9Y6K8 562 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 FAM86C2PA6NEL3 165 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 OR2AT4A6NND4 320 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 SLC28A1O00337 649 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 OGTO15294 1046 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 OR10H3O60404 316 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 UGT2B11O75310 529 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 CDK9P50750 372 aaKnown RBP13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 RABL6Q3YEC7 729 aaPredicted RBP13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 RNASE12Q5GAN4 147 aaKnown RBP13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 AAGABQ6PD74 315 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 MCFD2Q8NI22 146 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 ACTRT1Q8TDG2 376 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 GRIA3P42263 894 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 SLC9A4Q6AI14 798 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 CNSTQ6PJW8 725 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 ARHGAP36Q6ZRI8 547 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 CD302Q8IX05 232 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 TMEM169Q96HH4 297 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 ART5Q96L15 291 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 PTPRHQ9HD43 1115 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 SERPINB7O75635 380 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 E2F2Q14209 437 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 CYP4X1Q8N118 509 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 ANKFN1Q8N957 763 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 PCDH19Q8TAB3 1148 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 PI4K2AQ9BTU6 479 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 CATSPERZQ9NTU4 200 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 RDH8Q9NYR8 311 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 AASSQ9UDR5 926 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 BTN3A1O00481 513 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 CTSEP14091 401 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 NOS2P35228 1153 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 RPP38P78345 283 aaKnown RBP13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 GXYLT1Q4G148 440 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 UTS2BQ765I0 119 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 HTRA1Q92743 480 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 KCNK4Q9NYG8 393 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 MAT2BQ9NZL9 334 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 VDRP11473 427 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 ACAP2Q15057 778 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 ZIK1Q3SY52 487 aaPredicted RBP13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 TBL1YQ9BQ87 522 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 LAMC3Q9Y6N6 1575 aa13.99□□□□□ -0.17
CSPG4P12-202ENST00000559989 KANTRA0A1W2PQU2 76 aa13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 CBX4O00257 560 aa13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 HBP1O60381 514 aa13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 CCNE2O96020 404 aa13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 PROCP04070 461 aa13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 RPS2P15880 293 aaKnown RBP13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 DGKAP23743 735 aa13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 HOXC12P31275 282 aa13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 FAM76BQ5HYJ3 339 aa13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 WDR93Q6P2C0 686 aa13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 RD3Q7Z3Z2 195 aa13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 LDHDQ86WU2 507 aa13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 RPH3AQ9Y2J0 694 aaPredicted RBP13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 PEG3Q9GZU2 1588 aa13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 TBX3O15119 743 aa13.98□□□□□ -0.17
CSPG4P12-202ENST00000559989 GPR182O15218 404 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms