RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 IER5LQ5T953 404 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 TXNDC11Q6PKC3 985 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 TPRG1Q6ZUI0 275 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 NUDT18Q6ZVK8 323 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 RALGPS2Q86X27 583 aaPredicted RBP10.6□□□□□ -0.71
TPM1-221ENST00000559831 IFT20Q8IY31 132 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 SH2D3CQ8N5H7 860 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 CNTD1Q8N815 330 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 TSEN2Q8NCE0 465 aaKnown RBP10.6□□□□□ -0.71
TPM1-221ENST00000559831 UCMAQ8WVF2 138 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 EXOC4Q96A65 974 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 TM6SF2Q9BZW4 377 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 POLR1EQ9GZS1 481 aaKnown RBP10.6□□□□□ -0.71
TPM1-221ENST00000559831 TNKS2Q9H2K2 1166 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 ETNK1Q9HBU6 452 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 SCUBE2Q9NQ36 999 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 FAM114A2Q9NRY5 505 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 ELOVL2Q9NXB9 296 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 LHX3Q9UBR4 397 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 TPX2Q9ULW0 747 aaKnown RBP10.6□□□□□ -0.71
TPM1-221ENST00000559831 DUSP12Q9UNI6 340 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 ATP8A1Q9Y2Q0 1164 aa10.6□□□□□ -0.71
TPM1-221ENST00000559831 SPTBN5Q9NRC6 3674 aaKnown RBP10.59□□□□□ -0.71
TPM1-221ENST00000559831 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.59□□□□□ -0.71
TPM1-221ENST00000559831 MUSKO15146 869 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 TIMM44O43615 452 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 GJB3O75712 270 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 SEC31AO94979 1220 aaKnown RBP10.59□□□□□ -0.71
TPM1-221ENST00000559831 SRPRAP08240 638 aaKnown RBP10.59□□□□□ -0.71
TPM1-221ENST00000559831 DLDP09622 509 aaKnown RBP10.59□□□□□ -0.71
TPM1-221ENST00000559831 IVDP26440 423 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 HSPA9P38646 679 aaKnown RBP10.59□□□□□ -0.71
TPM1-221ENST00000559831 NNMTP40261 264 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 CD86P42081 329 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 RGRP47804 291 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 SCNN1BP51168 640 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 ITGA8P53708 1063 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 SEC13P55735 322 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 NIPAL4Q0D2K0 466 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 CALCOCO2Q13137 446 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 EIF4HQ15056 248 aaKnown RBP10.59□□□□□ -0.71
TPM1-221ENST00000559831 DLG2Q15700 870 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 SLC44A4Q53GD3 710 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 INO80DQ53TQ3 878 aaPredicted RBP10.59□□□□□ -0.71
TPM1-221ENST00000559831 C22orf39Q6P5X5 142 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 METTL3Q86U44 580 aaKnown RBP10.59□□□□□ -0.71
TPM1-221ENST00000559831 SUGP1Q8IWZ8 645 aaKnown RBP10.59□□□□□ -0.71
TPM1-221ENST00000559831 RYBPQ8N488 228 aaPredicted RBP10.59□□□□□ -0.71
TPM1-221ENST00000559831 GPR161Q8N6U8 529 aaKnown RBP10.59□□□□□ -0.71
TPM1-221ENST00000559831 BBOF1Q8ND07 529 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 SPATA22Q8NHS9 363 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 MRGPRX3Q96LB0 322 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 PSKH2Q96QS6 385 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 RBM15Q96T37 977 aaKnown RBP eCLIP10.59□□□□□ -0.71
TPM1-221ENST00000559831 SEMA3CQ99985 751 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 MGME1Q9BQP7 344 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 FBRSL1Q9HCM7 1045 aaKnown RBP10.59□□□□□ -0.71
TPM1-221ENST00000559831 ZDHHC4Q9NPG8 344 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 GDF3Q9NR23 364 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 SLC2A4RGQ9NR83 387 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 UBP1Q9NZI7 540 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 WHRNQ9P202 907 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 SLCO3A1Q9UIG8 710 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 ANAPC5Q9UJX4 755 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 CA14Q9ULX7 337 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 PLA2G4CQ9UP65 541 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 SLC8A2Q9UPR5 921 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 SORCS3Q9UPU3 1222 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 HS3ST2Q9Y278 367 aa10.59□□□□□ -0.71
TPM1-221ENST00000559831 MYLKQ15746 1914 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 UQCRHLA0A096LP55 91 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 TCRBV7S3A2A0A539 114 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 GOLGA6CA6NDK9 693 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 GOLGA6BA6NDN3 693 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 C19orf67A6NJJ6 358 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 TTC34A8MYJ7 566 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 BHMG1C9JSJ3 638 aaPredicted RBP10.58□□□□□ -0.72
TPM1-221ENST00000559831 GOLGA8MH3BSY2 632 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 CTIFO43310 598 aaKnown RBP10.58□□□□□ -0.72
TPM1-221ENST00000559831 PMPCBO75439 489 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 IGSF6O95976 241 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 EGFP01133 1207 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 APRTP07741 180 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 UQCRHP07919 91 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 GOLGA6DP0CG33 693 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 HLA-EP13747 358 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 ITIH2P19823 946 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 CARSP49589 748 aaKnown RBP10.58□□□□□ -0.72
TPM1-221ENST00000559831 GEMP55040 296 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 PLTPP55058 493 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 SEMA5AQ13591 1074 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 SPARCL1Q14515 664 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 MLF2Q15773 248 aaPredicted RBP10.58□□□□□ -0.72
TPM1-221ENST00000559831 PCSK7Q16549 785 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 PTPRNQ16849 979 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 DGKKQ5KSL6 1271 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 RNASEH2BQ5TBB1 312 aaKnown RBP10.58□□□□□ -0.72
TPM1-221ENST00000559831 EMC10Q5UCC4 262 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 ANKRD22Q5VYY1 191 aa10.58□□□□□ -0.72
TPM1-221ENST00000559831 EGFLAMQ63HQ2 1017 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms