RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TMEM233B4DJY2 109 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 AIM2O14862 343 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 AURKAO14965 403 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 IRAK2O43187 625 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 GRID2O43424 1007 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 FKBP6O75344 327 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 ARSAP15289 507 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 PIK3R1P27986 724 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 SLC1A2P43004 574 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 COG7P83436 770 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 DSG1Q02413 1049 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 BTKQ06187 659 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 SEPT6Q14141 434 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 TAF1CQ15572 869 aaPredicted RBP10.19□□□□□ -0.78
LRRC28-216ENST00000559819 PCSK7Q16549 785 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 LSM12Q3MHD2 195 aaKnown RBP10.19□□□□□ -0.78
LRRC28-216ENST00000559819 PCID2Q5JVF3 399 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 ARTNQ5T4W7 220 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 RNF220Q5VTB9 566 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 LIPMQ5VYY2 423 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 LRRC8EQ6NSJ5 796 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 LSMEM2Q8N112 164 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 IRGQQ8WZA9 623 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 CATSPER2Q96P56 530 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 PKMYT1Q99640 499 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 ILKAPQ9H0C8 392 aaPredicted RBP10.19□□□□□ -0.78
LRRC28-216ENST00000559819 ARHGEF38Q9NXL2 777 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 SSX2IPQ9Y2D8 614 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 GIT1Q9Y2X7 761 aa10.19□□□□□ -0.78
LRRC28-216ENST00000559819 FAM95CA0A1B0GW59 222 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 MATN2O00339 956 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 CACNG3O60359 315 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 DLX3O60479 287 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 IGLV3-25P01717 112 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 ZCCHC18P0CG32 403 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 NUMBP49757 651 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 SLC5A3P53794 718 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 ASPHQ12797 758 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 LBRQ14739 615 aaKnown RBP10.18□□□□□ -0.78
LRRC28-216ENST00000559819 CNGA3Q16281 694 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 PDCD2Q16342 344 aaPredicted RBP10.18□□□□□ -0.78
LRRC28-216ENST00000559819 FSCBQ5H9T9 825 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 TSTD2Q5T7W7 516 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 SDHAF4Q5VUM1 108 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 TMC7Q7Z402 723 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 DHDDSQ86SQ9 333 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 SNX32Q86XE0 403 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 SREK1Q8WXA9 508 aaKnown RBP10.18□□□□□ -0.78
LRRC28-216ENST00000559819 FCRL2Q96LA5 508 aaPredicted RBP10.18□□□□□ -0.78
LRRC28-216ENST00000559819 TSNARE1Q96NA8 513 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 ACBD6Q9BR61 282 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 DRC3Q9H069 523 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 OSBPL2Q9H1P3 480 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 EBF3Q9H4W6 596 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 NMUR1Q9HB89 426 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 RAP2CQ9Y3L5 183 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 CCNCP24863 283 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 ARCN1P48444 511 aaKnown RBP10.18□□□□□ -0.78
LRRC28-216ENST00000559819 RPL14P50914 215 aaKnown RBP10.18□□□□□ -0.78
LRRC28-216ENST00000559819 SLC12A1Q13621 1099 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 SFT2D3Q587I9 215 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 BTBD8Q5XKL5 378 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 NXNQ6DKJ4 435 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 OR52E8Q6IFG1 317 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 SCD5Q86SK9 330 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 LINC00523Q86TU6 105 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 METTL23Q86XA0 190 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 FBXW8Q8N3Y1 598 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 CCNYL1Q8N7R7 359 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 PPHLN1Q8NEY8 458 aaKnown RBP10.18□□□□□ -0.78
LRRC28-216ENST00000559819 STYXQ8WUJ0 223 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 GATA6Q92908 595 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 ELMO2Q96JJ3 720 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 FCRL5Q96RD9 977 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 IL12RB2Q99665 862 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 TRPV6Q9H1D0 765 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 RBM22Q9NW64 420 aaKnown RBP eCLIP10.18□□□□□ -0.78
LRRC28-216ENST00000559819 PADI3Q9ULW8 664 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 ARHGAP26Q9UNA1 814 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 ANKRD6Q9Y2G4 727 aa10.18□□□□□ -0.78
LRRC28-216ENST00000559819 AAR2Q9Y312 384 aaKnown RBP10.18□□□□□ -0.78
LRRC28-216ENST00000559819 TTC24A2A3L6 582 aaPredicted RBP10.17□□□□□ -0.78
LRRC28-216ENST00000559819 NEMP2A6NFY4 417 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 ENO4A6NNW6 628 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 ZNF189O75820 626 aaPredicted RBP10.17□□□□□ -0.78
LRRC28-216ENST00000559819 RAG1P15918 1043 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 PEX2P28328 305 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 CTGFP29279 349 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 CRABP2P29373 138 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 RPL9P32969 192 aaKnown RBP10.17□□□□□ -0.78
LRRC28-216ENST00000559819 MSX2P35548 267 aaPredicted RBP10.17□□□□□ -0.78
LRRC28-216ENST00000559819 THPOP40225 353 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 RGS2P41220 211 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 NUDT2P50583 147 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 TAS2R39P59534 338 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 CACNB2Q08289 660 aaPredicted RBP10.17□□□□□ -0.78
LRRC28-216ENST00000559819 MGAT3Q09327 533 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 EIF4EBP2Q13542 120 aaPredicted RBP10.17□□□□□ -0.78
LRRC28-216ENST00000559819 ZNF789Q5FWF6 425 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 SEL1L3Q68CR1 1132 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms