RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 Q6ZVU0 165 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 TRMT11Q7Z4G4 463 aaKnown RBP9.2□□□□□ -0.94
HMG20A-209ENST00000559728 SLC13A5Q86YT5 568 aaPredicted RBP9.2□□□□□ -0.94
HMG20A-209ENST00000559728 CCDC50Q8IVM0 306 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 RASGEF1CQ8N431 466 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 CNTD1Q8N815 330 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 ATP11CQ8NB49 1132 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 TSEN2Q8NCE0 465 aaKnown RBP9.2□□□□□ -0.94
HMG20A-209ENST00000559728 CHST14Q8NCH0 376 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 PRSS33Q8NF86 280 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 ACTL9Q8TC94 416 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 COG1Q8WTW3 980 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 FAM131CQ96AQ9 280 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 ISG20Q96AZ6 181 aaKnown RBP9.2□□□□□ -0.94
HMG20A-209ENST00000559728 HAUS1Q96CS2 278 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 MRGPRX1Q96LB2 322 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 HHIPQ96QV1 700 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 FAM118BQ9BPY3 351 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 RSPH9Q9H1X1 276 aaPredicted RBP9.2□□□□□ -0.94
HMG20A-209ENST00000559728 TNKS2Q9H2K2 1166 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 C10orf88Q9H8K7 445 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 EBF1Q9UH73 591 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 SLC25A13Q9UJS0 675 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 SARDHQ9UL12 918 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 PPM1HQ9ULR3 514 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 HEY1Q9Y5J3 304 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 WASF2Q9Y6W5 498 aa9.2□□□□□ -0.94
HMG20A-209ENST00000559728 CHD5Q8TDI0 1954 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 EDDM13A0A1B0GTR0 161 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 TCRBV21S2A2A0A5A6 115 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 TTC24A2A3L6 582 aaPredicted RBP9.19□□□□□ -0.94
HMG20A-209ENST00000559728 ZSCAN5CA6NGD5 496 aaPredicted RBP9.19□□□□□ -0.94
HMG20A-209ENST00000559728 MCF2LO15068 1137 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 MATN3O15232 486 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 INSIG1O15503 277 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 KIF5CO60282 957 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 CCNCP24863 283 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 GKP32189 559 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 NR2C2P49116 596 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 CCR3P51677 355 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 DGKEP52429 567 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 NRLP54845 237 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 ST8SIA6P61647 398 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 GNG11P61952 73 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 RPS14P62263 151 aaKnown RBP9.19□□□□□ -0.94
HMG20A-209ENST00000559728 OTUD4Q01804 1114 aaKnown RBP9.19□□□□□ -0.94
HMG20A-209ENST00000559728 WASHC5Q12768 1159 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 TCF15Q12870 199 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 ZBTB17Q13105 803 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 ANGPT1Q15389 498 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 ATXN7L2Q5T6C5 722 aaPredicted RBP9.19□□□□□ -0.94
HMG20A-209ENST00000559728 DPY19L3Q6ZPD9 716 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 LRRC49Q8IUZ0 686 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 STK40Q8N2I9 435 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 PCDH20Q8N6Y1 951 aaKnown RBP9.19□□□□□ -0.94
HMG20A-209ENST00000559728 OR2T3Q8NH03 318 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 SLC35B2Q8TB61 432 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 CASKIN2Q8WXE0 1202 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 MS4A14Q96JA4 679 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 ZNF599Q96NL3 588 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 QKIQ96PU8 341 aaKnown RBP eCLIP9.19□□□□□ -0.94
HMG20A-209ENST00000559728 PSKH2Q96QS6 385 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 IL12RB2Q99665 862 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 MGME1Q9BQP7 344 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 MAK16Q9BXY0 300 aaKnown RBP9.19□□□□□ -0.94
HMG20A-209ENST00000559728 TM6SF2Q9BZW4 377 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 USP29Q9HBJ7 922 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 SMARCAL1Q9NZC9 954 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 UBA2Q9UBT2 640 aaPredicted RBP9.19□□□□□ -0.94
HMG20A-209ENST00000559728 SUN2Q9UH99 717 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 TSR3Q9UJK0 312 aaKnown RBP9.19□□□□□ -0.94
HMG20A-209ENST00000559728 FBXO4Q9UKT5 387 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 SNX12Q9UMY4 172 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 ZNF318Q5VUA4 2279 aa9.19□□□□□ -0.94
HMG20A-209ENST00000559728 KCNK1O00180 336 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 ZNF185O15231 689 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 TJP3O95049 919 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 APBB3O95704 486 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 GSRP00390 522 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 MMP2P08253 660 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 SP9P0CG40 484 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 MX2P20592 715 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 CD68P34810 354 aaPredicted RBP9.18□□□□□ -0.94
HMG20A-209ENST00000559728 DRD3P35462 400 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 CCNHP51946 323 aaPredicted RBP9.18□□□□□ -0.94
HMG20A-209ENST00000559728 IFI35P80217 286 aaPredicted RBP9.18□□□□□ -0.94
HMG20A-209ENST00000559728 CSTF1Q05048 431 aaKnown RBP9.18□□□□□ -0.94
HMG20A-209ENST00000559728 ZNF33AQ06730 810 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 NIPAL4Q0D2K0 466 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 HNRNPDQ14103 355 aaKnown RBP9.18□□□□□ -0.94
HMG20A-209ENST00000559728 ELAVL3Q14576 367 aaKnown RBP9.18□□□□□ -0.94
HMG20A-209ENST00000559728 RFTN1Q14699 578 aaPredicted RBP9.18□□□□□ -0.94
HMG20A-209ENST00000559728 LBRQ14739 615 aaKnown RBP9.18□□□□□ -0.94
HMG20A-209ENST00000559728 PDK1Q15118 436 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 MAP7D1Q3KQU3 841 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 CARD16Q5EG05 197 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 MIA3Q5JRA6 1907 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 TMCO4Q5TGY1 634 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 ALG1LQ6GMV1 187 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 ANO7Q6IWH7 933 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms