RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PRPF39Q86UA1 669 aaKnown RBP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 CIR1Q86X95 450 aaPredicted RBP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 LRRC49Q8IUZ0 686 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 SLC35F5Q8WV83 523 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 NMD3Q96D46 503 aaKnown RBP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 SLC4A5Q9BY07 1137 aa10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 TRMT6Q9UJA5 497 aaKnown RBP10.81□□□□□ -0.68
CARMIL3-202ENST00000559694 LOC100653049A0A140TA62 436 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 GOLGA8TH3BQL2 631 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 SUPT3HO75486 399 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 KRT34O76011 436 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 UNC5CO95185 931 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 PROZP22891 400 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 RPL22P35268 128 aaKnown RBP10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 BMPR1AP36894 532 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 ROR2Q01974 943 aaKnown RBP10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 INCA1Q0VD86 236 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 TTLL9Q3SXZ7 439 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 CLLU1OSQ5K130 101 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 TMTC4Q5T4D3 741 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 IRGCQ6NXR0 463 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 C12orf76Q8N812 135 aaPredicted RBP10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 STRA6Q9BX79 667 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 FAM96AQ9H5X1 160 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 INSL5Q9Y5Q6 135 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 DDX60LQ5H9U9 1706 aaKnown RBP10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 GOLGA8QA0A0J9YX86 632 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 GOLGA8OA6NCC3 632 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 GOLGA8NF8WBI6 632 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 LIASO43766 372 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 EEF1DP29692 281 aaKnown RBP10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 NCALDP61601 193 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 RTP2Q5QGT7 225 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 C1orf220Q5T0J3 134 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 LINGO4Q6UY18 593 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 GLT6D1Q7Z4J2 308 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 RGL4Q8IZJ4 473 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 FLCNQ8NFG4 579 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 CCDC138Q96M89 665 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 CACYBPQ9HB71 228 aaKnown RBP10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 PCDHB9Q9Y5E1 797 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 SSC5DA1L4H1 1573 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 FSCN2O14926 492 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 SERPIND1P05546 499 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 CD48P09326 243 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 SSTR1P30872 391 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 SLC34A1Q06495 639 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 MPP3Q13368 585 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 CCDC142Q17RM4 750 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 LACTB2Q53H82 288 aaPredicted RBP10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 ACBD5Q5T8D3 534 aaPredicted RBP10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 STRA8Q7Z7C7 330 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 PSTKQ8IV42 348 aaKnown RBP10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 OR7D4Q8NG98 312 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 OR52K1Q8NGK4 314 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 SLC22A17Q8WUG5 538 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 USP6NLQ92738 828 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 P2RY11Q96G91 374 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 MLPHQ9BV36 600 aaPredicted RBP10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 CD274Q9NZQ7 290 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 AGO1Q9UL18 857 aaKnown RBP10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 MYH11P35749 1972 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 WDR27A2RRH5 827 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 HEATR9A2RTY3 570 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 EDN1P05305 212 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 ITGB1P05556 798 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 PEX5P50542 639 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 FAAP100Q0VG06 881 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 MRPL10Q7Z7H8 261 aaKnown RBP10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 LMO3Q8TAP4 145 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 FAM111AQ96PZ2 611 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 CYP2S1Q96SQ9 504 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 TBL1YQ9BQ87 522 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 PPCSQ9HAB8 311 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 ETNK2Q9NVF9 386 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 CTNNAL1Q9UBT7 734 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 OGDHLQ9ULD0 1010 aa10.8□□□□□ -0.68
CARMIL3-202ENST00000559694 TEX28O15482 410 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 ENTPD5O75356 428 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 ESRRBO95718 433 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 HAPLN1P10915 354 aaPredicted RBP10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 RHOQP17081 205 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 ITGB6P18564 788 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 FSHRP23945 695 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 L1CAMP32004 1257 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 PTDSS1P48651 473 aaKnown RBP10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 HDAC4P56524 1084 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 WDR5P61964 334 aaKnown RBP10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 RPS24P62847 133 aaKnown RBP10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 CRADDP78560 199 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 STX3Q13277 289 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 TRIM48Q8IWZ4 208 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 ZC3H3Q8IXZ2 948 aaKnown RBP10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 CPA6Q8N4T0 437 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 GFM2Q969S9 779 aaKnown RBP10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 THAP11Q96EK4 314 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 KCTD15Q96SI1 283 aaPredicted RBP10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 SHCBP1LQ9BZQ2 653 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 ATP13A3Q9H7F0 1226 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms