RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 BNIPLQ7Z465 357 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 PTAR1Q7Z6K3 402 aaPredicted RBP13.37□□□□□ -0.27
TPM1-220ENST00000559556 XYLT1Q86Y38 959 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 DCP2Q8IU60 420 aaKnown RBP13.37□□□□□ -0.27
TPM1-220ENST00000559556 CREBRFQ8IUR6 639 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 PCDH20Q8N6Y1 951 aaKnown RBP13.37□□□□□ -0.27
TPM1-220ENST00000559556 TMEM35BQ8NCS4 154 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 OR7D4Q8NG98 312 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 SLC39A7Q92504 469 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 CEP44Q9C0F1 390 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 TNKS2Q9H2K2 1166 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 TMPRSS4Q9NRS4 437 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 MPP6Q9NZW5 540 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 PCDHB1Q9Y5F3 818 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 HS3ST3A1Q9Y663 406 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 U3KQA8 63 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 UBR5O95071 2799 aaPredicted RBP13.37□□□□□ -0.27
TPM1-220ENST00000559556 HECTD1Q9ULT8 2610 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 CXorf51AA0A1B0GTR3 108 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 TEX51A0A1B0GUA7 166 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 SCAMP1O15126 338 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 AP1G1O43747 822 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 OPA1O60313 960 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 ZMPSTE24O75844 475 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 DXOO77932 396 aaKnown RBP13.36□□□□□ -0.27
TPM1-220ENST00000559556 PRB1P04280 392 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 ADRB3P13945 408 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 FLT3P36888 993 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 RECQLP46063 649 aaPredicted RBP13.36□□□□□ -0.27
TPM1-220ENST00000559556 HNRNPKP61978 463 aaKnown RBP eCLIP13.36□□□□□ -0.27
TPM1-220ENST00000559556 RPS21P63220 83 aaKnown RBP13.36□□□□□ -0.27
TPM1-220ENST00000559556 TRNP1Q6NT89 227 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 TMC6Q7Z403 805 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 ZSCAN30Q86W11 494 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 SPACA3Q8IXA5 215 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 FAM181AQ8N9Y4 354 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 C18orf8Q96DM3 657 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 APOLD1Q96LR9 279 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 DEPDC7Q96QD5 511 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 HAPLN3Q96S86 360 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 SLC17A9Q9BYT1 436 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 CAAP1Q9H8G2 361 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 USP29Q9HBJ7 922 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 COL12A1Q99715 3063 aa13.36□□□□□ -0.27
TPM1-220ENST00000559556 SDK2Q58EX2 2172 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 SPTY2D1-AS1A0A0U1RR47 76 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 POM121BA6NF01 834 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 NEMP2A6NFY4 417 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 LSM8O95777 96 aaKnown RBP13.35□□□□□ -0.27
TPM1-220ENST00000559556 NME1P15531 152 aaKnown RBP13.35□□□□□ -0.27
TPM1-220ENST00000559556 L1CAMP32004 1257 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 PCBP4P57723 403 aaKnown RBP13.35□□□□□ -0.27
TPM1-220ENST00000559556 ARF5P84085 180 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 SLC20A2Q08357 652 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 C19orf57Q0VDD7 668 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 CCDC173Q0VFZ6 552 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 FGL2Q14314 439 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 FZD2Q14332 565 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 MIIPQ5JXC2 388 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 RETSATQ6NUM9 610 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 Q6ZSR6 202 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 PARS2Q7L3T8 475 aaKnown RBP13.35□□□□□ -0.27
TPM1-220ENST00000559556 ARCQ7LC44 396 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 GPR155Q7Z3F1 870 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 ZNF548Q8NEK5 533 aaPredicted RBP13.35□□□□□ -0.27
TPM1-220ENST00000559556 HIC2Q96JB3 615 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 BMFQ96LC9 184 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 ZNF578Q96N58 590 aaPredicted RBP13.35□□□□□ -0.27
TPM1-220ENST00000559556 DUSP23Q9BVJ7 150 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 ZYG11BQ9C0D3 744 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 NDST4Q9H3R1 872 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 ATP13A1Q9HD20 1204 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 EVA1BQ9NVM1 165 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 DNAJC28Q9NX36 388 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 PPARGC1AQ9UBK2 798 aaKnown RBP13.35□□□□□ -0.27
TPM1-220ENST00000559556 FADS3Q9Y5Q0 445 aa13.35□□□□□ -0.27
TPM1-220ENST00000559556 K7ESM1 405 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 RIOK3O14730 519 aaKnown RBP13.34□□□□□ -0.27
TPM1-220ENST00000559556 RAD51BO15315 384 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 CSF2P04141 144 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 CYP11B1P15538 503 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 DUSP3P51452 185 aaPredicted RBP13.34□□□□□ -0.27
TPM1-220ENST00000559556 CCNHP51946 323 aaPredicted RBP13.34□□□□□ -0.27
TPM1-220ENST00000559556 GNA12Q03113 381 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 DRAP1Q14919 205 aaPredicted RBP13.34□□□□□ -0.27
TPM1-220ENST00000559556 ZCCHC8Q6NZY4 707 aaKnown RBP13.34□□□□□ -0.27
TPM1-220ENST00000559556 PARGQ86W56 976 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 FAM114A1Q8IWE2 563 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 PLPP6Q8IY26 295 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 MLKLQ8NB16 471 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 ZNF248Q8NDW4 579 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 ISG20Q96AZ6 181 aaKnown RBP13.34□□□□□ -0.27
TPM1-220ENST00000559556 FEM1CQ96JP0 617 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 LGMNQ99538 433 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 KLF6Q99612 283 aaPredicted RBP13.34□□□□□ -0.27
TPM1-220ENST00000559556 HEPHQ9BQS7 1158 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 PDCL3Q9H2J4 239 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 TMEM59LQ9UK28 342 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 FHOD1Q9Y613 1164 aa13.34□□□□□ -0.27
TPM1-220ENST00000559556 H3BM21 787 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms