RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 THADAQ6YHU6 1953 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 SPAG17Q6Q759 2223 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 CXorf51AA0A1B0GTR3 108 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 TARSL2A2RTX5 802 aaKnown RBP11.07□□□□□ -0.64
TPM1-217ENST00000559108 NPC1O15118 1278 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 ZNF185O15231 689 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 MID1O15344 667 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 SPINT1O43278 529 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 CR2P20023 1033 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 HOXA6P31267 233 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 DRD3P35462 400 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 PSMD8P48556 350 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 ST8SIA6P61647 398 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 WASHC5Q12768 1159 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 LBRQ14739 615 aaKnown RBP11.07□□□□□ -0.64
TPM1-217ENST00000559108 CARD16Q5EG05 197 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 TMCO4Q5TGY1 634 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 ZC3H18Q86VM9 953 aaKnown RBP11.07□□□□□ -0.64
TPM1-217ENST00000559108 SLC13A5Q86YT5 568 aaPredicted RBP11.07□□□□□ -0.64
TPM1-217ENST00000559108 TMPRSS6Q8IU80 811 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 UBL4BQ8N7F7 174 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 OR2AP1Q8NGE2 309 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 GRIN3AQ8TCU5 1115 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 QKIQ96PU8 341 aaKnown RBP eCLIP11.07□□□□□ -0.644e-9■■■■■ 47.8
TPM1-217ENST00000559108 GORASP1Q9BQQ3 440 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 CEP44Q9C0F1 390 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 CARD9Q9H257 536 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 FAM86C1Q9NVL1 165 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 EVLQ9UI08 416 aaPredicted RBP11.07□□□□□ -0.64
TPM1-217ENST00000559108 FBXO4Q9UKT5 387 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 EFR3BQ9Y2G0 817 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 DMDP11532 3685 aa11.07□□□□□ -0.64
TPM1-217ENST00000559108 TP53BP1Q12888 1972 aaPredicted RBP11.07□□□□□ -0.64
TPM1-217ENST00000559108 ZSCAN5CA6NGD5 496 aaPredicted RBP11.06□□□□□ -0.64
TPM1-217ENST00000559108 C10orf142B7Z368 130 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 APOC4-APOC2K7ER74 178 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 MCF2LO15068 1137 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 MATN3O15232 486 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 HRO43593 1189 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 SYNCRIPO60506 623 aaKnown RBP11.06□□□□□ -0.64
TPM1-217ENST00000559108 PIGNO95427 931 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 GSRP00390 522 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 APOC2P02655 101 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 PTPN3P26045 913 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 CHRNA3P32297 505 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 CD68P34810 354 aaPredicted RBP11.06□□□□□ -0.64
TPM1-217ENST00000559108 RHOAP61586 193 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 GNG11P61952 73 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 DSC2Q02487 901 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 SLC20A2Q08357 652 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 NIPAL4Q0D2K0 466 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 TFDP2Q14188 446 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 ELAVL3Q14576 367 aaKnown RBP11.06□□□□□ -0.64
TPM1-217ENST00000559108 STARD3Q14849 445 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 PTPRRQ15256 657 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 CST6Q15828 149 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 INO80DQ53TQ3 878 aaPredicted RBP11.06□□□□□ -0.64
TPM1-217ENST00000559108 SDE2Q6IQ49 451 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 KIAA1324Q6UXG2 1013 aaKnown RBP11.06□□□□□ -0.64
TPM1-217ENST00000559108 NYAP1Q6ZVC0 841 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 CCDC13Q8IYE1 715 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 CAMKK1Q8N5S9 505 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 PCDH20Q8N6Y1 951 aaKnown RBP11.06□□□□□ -0.64
TPM1-217ENST00000559108 ZBTB44Q8NCP5 570 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 SLC35B2Q8TB61 432 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 ARRDC2Q8TBH0 407 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 FAM131CQ96AQ9 280 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 ISG20Q96AZ6 181 aaKnown RBP11.06□□□□□ -0.64
TPM1-217ENST00000559108 ZNF599Q96NL3 588 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 SMIM14Q96QK8 99 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 PSKH2Q96QS6 385 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 PHOX2BQ99453 314 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 IL12RB2Q99665 862 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 MGME1Q9BQP7 344 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 MAK16Q9BXY0 300 aaKnown RBP11.06□□□□□ -0.64
TPM1-217ENST00000559108 PRDM16Q9HAZ2 1276 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 USP36Q9P275 1121 aaKnown RBP11.06□□□□□ -0.64
TPM1-217ENST00000559108 HECAQ9UBI9 543 aaPredicted RBP11.06□□□□□ -0.64
TPM1-217ENST00000559108 HPCAL4Q9UM19 191 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 ZKSCAN5Q9Y2L8 839 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 JRKLQ9Y4A0 524 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 SCN8AQ9UQD0 1980 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 MYO15AQ9UKN7 3530 aa11.06□□□□□ -0.64
TPM1-217ENST00000559108 IGHV1OR15-9A0A0B4J2B8 117 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 PDE2AO00408 941 aaPredicted RBP11.05□□□□□ -0.64
TPM1-217ENST00000559108 AXIN1O15169 862 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 KIF5CO60282 957 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 LILRB5O75023 590 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 LEFTY1O75610 366 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 MMP2P08253 660 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 CCNB1P14635 433 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 ZFXP17010 805 aaPredicted RBP11.05□□□□□ -0.64
TPM1-217ENST00000559108 ITIH2P19823 946 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 CCNCP24863 283 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 RBL1P28749 1068 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 ABL2P42684 1182 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 MMP13P45452 471 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 NR2C2P49116 596 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 TPMTP51580 245 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 GDF10P55107 478 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms