RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 TRIM69Q86WT6 500 aa11.46□□□□□ -0.57
BMP4-204ENST00000558961 PSTKQ8IV42 348 aaKnown RBP11.46□□□□□ -0.57
BMP4-204ENST00000558961 OR14C36Q8NHC7 312 aa11.46□□□□□ -0.57
BMP4-204ENST00000558961 GANCQ8TET4 914 aa11.46□□□□□ -0.57
BMP4-204ENST00000558961 VOPP1Q96AW1 172 aa11.46□□□□□ -0.57
BMP4-204ENST00000558961 PEBP4Q96S96 227 aa11.46□□□□□ -0.57
BMP4-204ENST00000558961 EPAS1Q99814 870 aa11.46□□□□□ -0.57
BMP4-204ENST00000558961 TRIM7Q9C029 511 aa11.46□□□□□ -0.57
BMP4-204ENST00000558961 NHEJ1Q9H9Q4 299 aaPredicted RBP11.46□□□□□ -0.57
BMP4-204ENST00000558961 PREBQ9HCU5 417 aa11.46□□□□□ -0.57
BMP4-204ENST00000558961 ZNHIT6Q9NWK9 470 aaKnown RBP11.46□□□□□ -0.57
BMP4-204ENST00000558961 CNOT8Q9UFF9 292 aaKnown RBP11.46□□□□□ -0.57
BMP4-204ENST00000558961 DNAI1Q9UI46 699 aa11.46□□□□□ -0.57
BMP4-204ENST00000558961 PPP2R2CQ9Y2T4 447 aa11.46□□□□□ -0.57
BMP4-204ENST00000558961 FARP1Q9Y4F1 1045 aaPredicted RBP11.46□□□□□ -0.57
BMP4-204ENST00000558961 PCDHGB2Q9Y5G2 931 aa11.46□□□□□ -0.57
BMP4-204ENST00000558961 EPN1Q9Y6I3 576 aaPredicted RBP11.46□□□□□ -0.57
BMP4-204ENST00000558961 WASF2Q9Y6W5 498 aa11.46□□□□□ -0.57
BMP4-204ENST00000558961 SPTBN2O15020 2390 aa11.46□□□□□ -0.58
BMP4-204ENST00000558961 A0A1B0GVT2 93 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 ZSCAN5CA6NGD5 496 aaPredicted RBP11.45□□□□□ -0.58
BMP4-204ENST00000558961 FAM47DPA6NHR8 397 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 RNF103O00237 685 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 GIPC1O14908 333 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 VILLO15195 856 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 LRCH4O75427 683 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 NDUFA10O95299 355 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 CTSKP43235 329 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 CSNK1EP49674 416 aaKnown RBP11.45□□□□□ -0.58
BMP4-204ENST00000558961 PPP2CBP62714 309 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 PPP2CAP67775 309 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 HNRNPDQ14103 355 aaKnown RBP11.45□□□□□ -0.58
BMP4-204ENST00000558961 ACAP1Q15027 740 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 PARP15Q460N3 678 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 NEK5Q6P3R8 708 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 SCYL2Q6P3W7 929 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.45□□□□□ -0.58
BMP4-204ENST00000558961 DNAAF5Q86Y56 855 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 UMODL1-AS1Q8N2C9 162 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 CHST14Q8NCH0 376 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 DEFB124Q8NES8 71 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 CASKIN2Q8WXE0 1202 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 ZNF653Q96CK0 615 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 SLC6A18Q96N87 628 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 NCAPGQ9BPX3 1015 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 SPON2Q9BUD6 331 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 SNRNP25Q9BV90 132 aaKnown RBP11.45□□□□□ -0.58
BMP4-204ENST00000558961 HDAC8Q9BY41 377 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 TNKS2Q9H2K2 1166 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 SLC32A1Q9H598 525 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 CATSPERBQ9H7T0 1116 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 MRPL47Q9HD33 250 aaKnown RBP11.45□□□□□ -0.58
BMP4-204ENST00000558961 IL36AQ9UHA7 158 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 AP4E1Q9UPM8 1137 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 WASF3Q9UPY6 502 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 DMTF1Q9Y222 760 aa11.45□□□□□ -0.58
BMP4-204ENST00000558961 FNDC3AQ9Y2H6 1198 aaKnown RBP11.45□□□□□ -0.58
BMP4-204ENST00000558961 A0A087X0T9 212 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 A0A1W2PR77 199 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 PLK4O00444 970 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 KDELR3O43731 214 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 BNIP3LO60238 219 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 LEFTY1O75610 366 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 RNF8O76064 485 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 GSRP00390 522 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 FAM228BP0C875 321 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 ITGB7P26010 798 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 PCK1P35558 622 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 EIF4A3P38919 411 aaKnown RBP11.44□□□□□ -0.58
BMP4-204ENST00000558961 ARHGAP25P42331 645 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 RECQLP46063 649 aaPredicted RBP11.44□□□□□ -0.58
BMP4-204ENST00000558961 CCNHP51946 323 aaPredicted RBP11.44□□□□□ -0.58
BMP4-204ENST00000558961 ZNF135P52742 658 aaPredicted RBP11.44□□□□□ -0.58
BMP4-204ENST00000558961 POLD3Q15054 466 aaPredicted RBP11.44□□□□□ -0.58
BMP4-204ENST00000558961 ZNF423Q2M1K9 1284 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 TSR1Q2NL82 804 aaKnown RBP11.44□□□□□ -0.58
BMP4-204ENST00000558961 KIF19Q2TAC6 998 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 HLA-BQ31612 363 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 CARD16Q5EG05 197 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 ERMARDQ5T6L9 678 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 NAPEPLDQ6IQ20 393 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 LAYNQ6UX15 382 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 VPS36Q86VN1 386 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 NAXDQ8IW45 347 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 NIPA2Q8N8Q9 360 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 OR2AP1Q8NGE2 309 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 BAHD1Q8TBE0 780 aaPredicted RBP11.44□□□□□ -0.58
BMP4-204ENST00000558961 GRIN3AQ8TCU5 1115 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 ARRDC3Q96B67 414 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 PPP1R16AQ96I34 528 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 LRIG1Q96JA1 1093 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 HEPHQ9BQS7 1158 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 GAREM1Q9H706 876 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 LRRC19Q9H756 370 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 IL21RQ9HBE5 538 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 TM7SF3Q9NS93 570 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 DONSONQ9NYP3 566 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 HPCAL4Q9UM19 191 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 ANKRD6Q9Y2G4 727 aa11.44□□□□□ -0.58
BMP4-204ENST00000558961 FCF1Q9Y324 198 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms