RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 LGI2Q8N0V4 545 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 CFAP52Q8N1V2 620 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 EFHBQ8N7U6 833 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 GDAP1Q8TB36 358 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 ADAMTS19Q8TE59 1207 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 AZIN2Q96A70 460 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 ZNF707Q96C28 371 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-207ENST00000558763 MRGPRX2Q96LB1 330 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 PRKD2Q9BZL6 878 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 FAM107BQ9H098 131 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 SFXN1Q9H9B4 322 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 PIDD1Q9HB75 910 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 PDFQ9HBH1 243 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 IL1RAPL1Q9NZN1 696 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 PSAT1Q9Y617 370 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 A0A1W2PRU2 124 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 TRIM49D1C9J1S8 452 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 GOLGA8RI6L899 631 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 RAMP2O60895 175 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 RFPL1O75677 317 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 MMP2P08253 660 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 HOXD9P28356 352 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-207ENST00000558763 NEK3P51956 506 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 NTHL1P78549 312 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 CYP4F8P98187 520 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 PARP15Q460N3 678 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 RARS2Q5T160 578 aaKnown RBP13.16□□□□□ -0.3
SMAD3-207ENST00000558763 TTC39BQ5VTQ0 682 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-207ENST00000558763 ZNF449Q6P9G9 518 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 GRASPQ7Z6J2 395 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-207ENST00000558763 DENND1CQ8IV53 801 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 PGBD5Q8N414 524 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMAD3-207ENST00000558763 SMG7Q92540 1137 aaKnown RBP13.16□□□□□ -0.3
SMAD3-207ENST00000558763 TADA1Q96BN2 335 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 LRRC3Q9BY71 257 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 DZANK1Q9NVP4 752 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 NKIRAS1Q9NYS0 192 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 DNMT3BQ9UBC3 853 aaKnown RBP13.16□□□□□ -0.3
SMAD3-207ENST00000558763 CDH22Q9UJ99 828 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 AAR2Q9Y312 384 aaKnown RBP13.16□□□□□ -0.3
SMAD3-207ENST00000558763 RPS6KL1Q9Y6S9 549 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.15□□□□□ -0.3
SMAD3-207ENST00000558763 FAM237BA0A1B0GVD1 139 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 F5H5T6 163 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 GFRA2O00451 464 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 USP1O94782 785 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 RHOP08100 348 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 PTPN2P17706 415 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 CA4P22748 312 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 CORO1AP31146 461 aaKnown RBP13.15□□□□□ -0.3
SMAD3-207ENST00000558763 CCNFP41002 786 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 CCR2P41597 374 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 YBEYP58557 167 aaPredicted RBP13.15□□□□□ -0.3
SMAD3-207ENST00000558763 RPS24P62847 133 aaKnown RBP13.15□□□□□ -0.3
SMAD3-207ENST00000558763 CDH17Q12864 832 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 BMPR2Q13873 1038 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 ANO4Q32M45 955 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 SPANXN3Q5MJ09 141 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 NAPEPLDQ6IQ20 393 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 RANBP10Q6VN20 620 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 GAREM2Q75VX8 874 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 MYLIPQ8WY64 445 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 MFSD3Q96ES6 412 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 IMP4Q96G21 291 aaKnown RBP13.15□□□□□ -0.3
SMAD3-207ENST00000558763 CERS2Q96G23 380 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 TBL1YQ9BQ87 522 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 SLC25A51Q9H1U9 297 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 C12orf65Q9H3J6 166 aaKnown RBP13.15□□□□□ -0.3
SMAD3-207ENST00000558763 ATXN3LQ9H3M9 355 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 TRPC7Q9HCX4 862 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 ATP13A1Q9HD20 1204 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 CLDND1Q9NY35 253 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 DONSONQ9NYP3 566 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 BFARQ9NZS9 450 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 STOML2Q9UJZ1 356 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 AGO1Q9UL18 857 aaKnown RBP13.15□□□□□ -0.3
SMAD3-207ENST00000558763 SOX13Q9UN79 622 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 ZFP37Q9Y6Q3 630 aaPredicted RBP13.15□□□□□ -0.3
SMAD3-207ENST00000558763 HELZP42694 1942 aaKnown RBP13.15□□□□□ -0.3
SMAD3-207ENST00000558763 UNC80Q8N2C7 3258 aa13.15□□□□□ -0.3
SMAD3-207ENST00000558763 C2orf16Q68DN1 1984 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 A0A0D9SEW6 157 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 PRAMEF11O60813 436 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 TBX10O75333 385 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 ANXA9O76027 345 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 POLBP06746 335 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 SNRPAP09012 282 aaKnown RBP13.14□□□□□ -0.31
SMAD3-207ENST00000558763 TPH1P17752 444 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 TAC1P20366 129 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 OR1E1P30953 314 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 ETV4P43268 484 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 PPP3CCP48454 512 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 NPY2RP49146 381 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 HARS2P49590 506 aaKnown RBP13.14□□□□□ -0.31
SMAD3-207ENST00000558763 DLX2Q07687 328 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-207ENST00000558763 IL10RBQ08334 325 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 PRPSAP1Q14558 356 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 POLD3Q15054 466 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-207ENST00000558763 ANKRD20A4Q4UJ75 823 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms