RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 SNX27Q96L92 541 aa10.43□□□□□ -0.74
MARK3-213ENST00000558611 CDCA3Q99618 268 aaPredicted RBP10.43□□□□□ -0.74
MARK3-213ENST00000558611 MAGEB5Q9BZ81 275 aa10.43□□□□□ -0.74
MARK3-213ENST00000558611 TLE6Q9H808 572 aa10.43□□□□□ -0.74
MARK3-213ENST00000558611 OLFML3Q9NRN5 406 aa10.43□□□□□ -0.74
MARK3-213ENST00000558611 ZNF212Q9UDV6 495 aa10.43□□□□□ -0.74
MARK3-213ENST00000558611 PRG3Q9Y2Y8 225 aaPredicted RBP10.43□□□□□ -0.74
MARK3-213ENST00000558611 DOCK6Q96HP0 2047 aa10.43□□□□□ -0.74
MARK3-213ENST00000558611 CASTOR2A6NHX0 329 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 F8W810 466 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 TRIM38O00635 465 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 PER2O15055 1255 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 TBX10O75333 385 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 SLC43A1O75387 559 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 TOX4O94842 621 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 GLP2RO95838 553 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 JUNP05412 331 aaKnown RBP10.42□□□□□ -0.74
MARK3-213ENST00000558611 ITGA5P08648 1049 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 SBK3P0C264 359 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 VSIG10L2P0DP72 767 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 CTSAP10619 480 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 IDEP14735 1019 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 MATR3P43243 847 aaKnown RBP eCLIP10.42□□□□□ -0.74
MARK3-213ENST00000558611 MRE11P49959 708 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 OSTNP61366 133 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 NUCB2P80303 420 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 MXRA7P84157 204 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 TAF5Q15542 800 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 DUSP6Q16828 381 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 LEXMQ3ZCV2 418 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 ZC2HC1CQ53FD0 456 aaPredicted RBP10.42□□□□□ -0.74
MARK3-213ENST00000558611 XKR4Q5GH76 650 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 GLRA4Q5JXX5 417 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 AFMIDQ63HM1 303 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 ADALQ6DHV7 355 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 ALKAL1Q6UXT8 129 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 ZNF720Q7Z2F6 126 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 ZNF605Q86T29 641 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 ATG4DQ86TL0 474 aaPredicted RBP10.42□□□□□ -0.74
MARK3-213ENST00000558611 RBM23Q86U06 439 aaKnown RBP10.42□□□□□ -0.74
MARK3-213ENST00000558611 PDSS2Q86YH6 399 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 SUGP1Q8IWZ8 645 aaKnown RBP10.42□□□□□ -0.74
MARK3-213ENST00000558611 REXO1L1PQ8IX06 675 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 CCDC65Q8IXS2 484 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 RNF168Q8IYW5 571 aaPredicted RBP10.42□□□□□ -0.74
MARK3-213ENST00000558611 MRPL43Q8N983 215 aaKnown RBP10.42□□□□□ -0.74
MARK3-213ENST00000558611 STAMQ92783 540 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 EID2BQ96D98 161 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 PPP1R10Q96QC0 940 aaKnown RBP10.42□□□□□ -0.74
MARK3-213ENST00000558611 PYM1Q9BRP8 204 aaKnown RBP10.42□□□□□ -0.74
MARK3-213ENST00000558611 HERC2P3Q9BVR0 1158 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 STRA6Q9BX79 667 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 PACSIN1Q9BY11 444 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 TRIM9Q9C026 710 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 SCAND2PQ9GZW5 306 aaPredicted RBP10.42□□□□□ -0.74
MARK3-213ENST00000558611 MRPL44Q9H9J2 332 aaKnown RBP10.42□□□□□ -0.74
MARK3-213ENST00000558611 RASSF1Q9NS23 344 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 PANK4Q9NVE7 773 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 CACNG4Q9UBN1 327 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 ITGB1BP2Q9UKP3 347 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 CRYL1Q9Y2S2 319 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 IRAK3Q9Y616 596 aa10.42□□□□□ -0.74
MARK3-213ENST00000558611 A0A087WWL8 130 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 SMIM28A0A1B0GU29 152 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 H3BQ06 376 aaPredicted RBP10.41□□□□□ -0.74
MARK3-213ENST00000558611 OGTO15294 1046 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 FAM189A1O60320 539 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 GCNT3O95395 438 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 CXCL14O95715 111 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 PFKFB1P16118 471 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 GABRB3P28472 473 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 CA8P35219 290 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 NDUFV1P49821 464 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 CDR1P51861 262 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 DLX2Q07687 328 aaPredicted RBP10.41□□□□□ -0.74
MARK3-213ENST00000558611 COASYQ13057 564 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 ALCAMQ13740 583 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 KCNC3Q14003 757 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 PTPN14Q15678 1187 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 GAGE13Q4V321 117 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 HERC4Q5GLZ8 1057 aaPredicted RBP10.41□□□□□ -0.74
MARK3-213ENST00000558611 PRR31Q5SQ13 230 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 RETSATQ6NUM9 610 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 SLC39A4Q6P5W5 647 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 BORAQ6PGQ7 559 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 CCDC150Q8NCX0 1101 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 VN1R2Q8NFZ6 395 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 STT3BQ8TCJ2 826 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 RABGGTAQ92696 567 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 NOX5Q96PH1 765 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 PAAF1Q9BRP4 392 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 TBC1D7Q9P0N9 293 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 ADAM28Q9UKQ2 775 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 PLEKHM1Q9Y4G2 1056 aa10.41□□□□□ -0.74
MARK3-213ENST00000558611 DOCK8Q8NF50 2099 aa10.4□□□□□ -0.74
MARK3-213ENST00000558611 SF3B1O75533 1304 aaKnown RBP eCLIP10.4□□□□□ -0.74
MARK3-213ENST00000558611 A0A0B4J269 797 aa10.4□□□□□ -0.74
MARK3-213ENST00000558611 AQP12BA6NM10 295 aa10.4□□□□□ -0.74
MARK3-213ENST00000558611 ANKRD63C9JTQ0 380 aa10.4□□□□□ -0.74
MARK3-213ENST00000558611 NDST3O95803 873 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms