RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 CEP44Q9C0F1 390 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 ISCUQ9H1K1 167 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 MAGEH1Q9H213 219 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TNKS2Q9H2K2 1166 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 SLC32A1Q9H598 525 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 RYDENQ9NUL5 291 aaKnown RBP8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 IFNKQ9P0W0 207 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 ARHGAP20Q9P2F6 1191 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 WASF3Q9UPY6 502 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 ANKRD6Q9Y2G4 727 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 FNDC3AQ9Y2H6 1198 aaKnown RBP8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 SNX11Q9Y5W9 270 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 IGF2RP11717 2491 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 SPAARA0A1B0GVQ0 90 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 A0A1W2PR77 199 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 WASH4PA8MWX3 477 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 GOLGA6L19H0YKK7 550 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 KPNA3O00505 521 aaPredicted RBP8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 KCNK3O14649 394 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 VILLO15195 856 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 KDELR3O43731 214 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 RAMP2O60895 175 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 CBFA2T3O75081 653 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 LEFTY1O75610 366 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 PRNPP04156 253 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 PSMA2P25787 234 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 EPHB2P29323 1055 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 ETFBP38117 255 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 AIF1P55008 147 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 SHC2P98077 582 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 POLD3Q15054 466 aaPredicted RBP8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 ZNF423Q2M1K9 1284 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 SKOR2Q2VWA4 1001 aaPredicted RBP8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 CARD16Q5EG05 197 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 CYP4V2Q6ZWL3 525 aaPredicted RBP8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 TRIM69Q86WT6 500 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 RTL3Q8N8U3 475 aaKnown RBP8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 FNIP1Q8TF40 1166 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 CPLX3Q8WVH0 158 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 VOPP1Q96AW1 172 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 ISG20Q96AZ6 181 aaKnown RBP8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 CCDC114Q96M63 670 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 PEBP4Q96S96 227 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 EPAS1Q99814 870 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 HDAC8Q9BY41 377 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 KLC2Q9H0B6 622 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 TM7SF3Q9NS93 570 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 GPATCH2LQ9NWQ4 482 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 CNOT8Q9UFF9 292 aaKnown RBP8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 IL36AQ9UHA7 158 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 TPX2Q9ULW0 747 aaKnown RBP8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 CAPN11Q9UMQ6 739 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 FCF1Q9Y324 198 aaKnown RBP8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 PCDHGB2Q9Y5G2 931 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 WASF2Q9Y6W5 498 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 USP24Q9UPU5 2620 aa8.95□□□□□ -0.98
SNRPA1-206ENST00000558059 PTPRBP23467 1997 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 RASA4BC9J798 803 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 H0Y8X5 98 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 RASA4O43374 803 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 CREB3O43889 395 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 TOP3BO95985 862 aaKnown RBP8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 GYPCP04921 128 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 SERPING1P05155 500 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 CD38P28907 300 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 MIPP30301 263 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 MAT2AP31153 395 aaKnown RBP8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 RECQLP46063 649 aaPredicted RBP8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 DNA2P51530 1060 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 CCNHP51946 323 aaPredicted RBP8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 YBEYP58557 167 aaPredicted RBP8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 SIM1P81133 766 aaPredicted RBP8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 ZBED6P86452 979 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 CA9Q16790 459 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 ERMARDQ5T6L9 678 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 LEKR1Q6ZMV7 388 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 ERN2Q76MJ5 926 aaKnown RBP8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 ADAT2Q7Z6V5 191 aaKnown RBP8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 PRPF39Q86UA1 669 aaKnown RBP8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 NAXDQ8IW45 347 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 UMODL1-AS1Q8N2C9 162 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 GRIN3AQ8TCU5 1115 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 ZNF653Q96CK0 615 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 SERAC1Q96JX3 654 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 CNTNAP3BQ96NU0 1288 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 HEPHQ9BQS7 1158 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 CNTNAP3Q9BZ76 1288 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 CATSPERBQ9H7T0 1116 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 PREBQ9HCU5 417 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 HECAQ9UBI9 543 aaPredicted RBP8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 PCSK1NQ9UHG2 260 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 ANGPTL2Q9UKU9 493 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 HPCAL4Q9UM19 191 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 AP4E1Q9UPM8 1137 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 BZW2Q9Y6E2 419 aaKnown RBP8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 KMT2BQ9UMN6 2715 aaPredicted RBP8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 DMXL2Q8TDJ6 3036 aa8.94□□□□□ -0.98
SNRPA1-206ENST00000558059 ANKRD36A6QL64 1941 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 PLXNB3Q9ULL4 1909 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 LRRK1Q38SD2 2015 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms