RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 TYW5A2RUC4 315 aaKnown RBP9.62□□□□□ -0.87
NEDD1-211ENST00000557454 KPNA3O00505 521 aaPredicted RBP9.62□□□□□ -0.87
NEDD1-211ENST00000557454 FPGTO14772 594 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 HGSO14964 777 aaPredicted RBP9.62□□□□□ -0.87
NEDD1-211ENST00000557454 MCF2LO15068 1137 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 IRAK2O43187 625 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 STX6O43752 255 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 LUC7L3O95232 432 aaKnown RBP9.62□□□□□ -0.87
NEDD1-211ENST00000557454 CD2BP2O95400 341 aaKnown RBP9.62□□□□□ -0.87
NEDD1-211ENST00000557454 PMS2P54278 862 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 PFN3P60673 137 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 ME3Q16798 604 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 ACCSLQ4AC99 568 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 CRTC2Q53ET0 693 aaPredicted RBP9.62□□□□□ -0.87
NEDD1-211ENST00000557454 TMEM135Q86UB9 458 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 CCDC117Q8IWD4 279 aaPredicted RBP9.62□□□□□ -0.87
NEDD1-211ENST00000557454 CFAP52Q8N1V2 620 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 Q8NA96 180 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 SCG3Q8WXD2 468 aaKnown RBP9.62□□□□□ -0.87
NEDD1-211ENST00000557454 EDEM1Q92611 657 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 ZNF516Q92618 1163 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 CYFIP2Q96F07 1278 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 CALML4Q96GE6 196 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 CCDC74BQ96LY2 380 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 KLF6Q99612 283 aaPredicted RBP9.62□□□□□ -0.87
NEDD1-211ENST00000557454 NUDT22Q9BRQ3 303 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 VRTNQ9H8Y1 702 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.62□□□□□ -0.87
NEDD1-211ENST00000557454 OLA1Q9NTK5 396 aaKnown RBP9.62□□□□□ -0.87
NEDD1-211ENST00000557454 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.62□□□□□ -0.87
NEDD1-211ENST00000557454 POLEQ07864 2286 aa9.62□□□□□ -0.87
NEDD1-211ENST00000557454 PKDREJQ9NTG1 2253 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 RNF103O00237 685 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 KIAA0391O15091 583 aaKnown RBP9.61□□□□□ -0.87
NEDD1-211ENST00000557454 ALOX15BO15296 676 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 KRT86O43790 486 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 ACSL4O60488 711 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 PHACTR2O75167 634 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 CBX6O95503 412 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 FURINP09958 794 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 PDCP20941 246 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 MAP4P27816 1152 aaKnown RBP9.61□□□□□ -0.87
NEDD1-211ENST00000557454 THOP1P52888 689 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 RPS21P63220 83 aaKnown RBP9.61□□□□□ -0.87
NEDD1-211ENST00000557454 ELOCQ15369 112 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 SNRNP35Q16560 246 aaKnown RBP9.61□□□□□ -0.87
NEDD1-211ENST00000557454 CERCAMQ5T4B2 595 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 BHLHA9Q7RTU4 235 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 SFTPA2Q8IWL1 248 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 NRSN1Q8IZ57 195 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 FSTL5Q8N475 847 aaPredicted RBP9.61□□□□□ -0.87
NEDD1-211ENST00000557454 CCDC112Q8NEF3 446 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 GPR156Q8NFN8 814 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 LARP4BQ92615 738 aaKnown RBP9.61□□□□□ -0.87
NEDD1-211ENST00000557454 C19orf60Q96EN9 201 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 DUSP16Q9BY84 665 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 IRX2Q9BZI1 471 aaPredicted RBP9.61□□□□□ -0.87
NEDD1-211ENST00000557454 NUCKS1Q9H1E3 243 aaKnown RBP9.61□□□□□ -0.87
NEDD1-211ENST00000557454 DYRK4Q9NR20 520 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 SLC39A1Q9NY26 324 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 RCOR3Q9P2K3 495 aaPredicted RBP9.61□□□□□ -0.87
NEDD1-211ENST00000557454 POLHQ9Y253 713 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 STAB1Q9NY15 2570 aa9.61□□□□□ -0.87
NEDD1-211ENST00000557454 IGHV5-10-1A0A0J9YXX1 117 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 ANKUB1A6NFN9 424 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 M0QYT0 321 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 CPNE6O95741 557 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 ALPIP09923 528 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 PDGFRAP16234 1089 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 GLB1P16278 677 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 F8A1P23610 371 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 SLC11A2P49281 568 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 PGDP52209 483 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 PPARDQ03181 441 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 SRSF11Q05519 484 aaKnown RBP9.6□□□□□ -0.87
NEDD1-211ENST00000557454 CYP24A1Q07973 514 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 ABHD18Q0P651 414 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 CCDC15Q0P6D6 951 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 BIRC3Q13489 604 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 ERV3-1Q14264 604 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 PSMD6Q15008 389 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 ZRSR2Q15696 482 aaKnown RBP9.6□□□□□ -0.87
NEDD1-211ENST00000557454 DLG2Q15700 870 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 AMZ1Q400G9 498 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 ANKS6Q68DC2 871 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 KIAA1161Q6NSJ0 714 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 LVRNQ6Q4G3 990 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 ERN2Q76MJ5 926 aaKnown RBP9.6□□□□□ -0.87
NEDD1-211ENST00000557454 KDELC2Q7Z4H8 507 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 PIM3Q86V86 326 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 UNC93AQ86WB7 457 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 FAM129CQ86XR2 697 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 RASSF8Q8NHQ8 419 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 RNF139Q8WU17 664 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 TRIM55Q9BYV6 548 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 ASPSCR1Q9BZE9 553 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 SLAMF7Q9NQ25 335 aa9.6□□□□□ -0.87
NEDD1-211ENST00000557454 TNRC6AQ8NDV7 1962 aaKnown RBP9.59□□□□□ -0.87
NEDD1-211ENST00000557454 ATP9BO43861 1147 aa9.59□□□□□ -0.87
NEDD1-211ENST00000557454 REC8O95072 547 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms