RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 SEPT3Q9UH03 358 aa24.13■■□□□ 1.45
SIX4-203ENST00000556952 CLEC4EQ9ULY5 219 aa24.13■■□□□ 1.45
SIX4-203ENST00000556952 AAR2Q9Y312 384 aaKnown RBP24.13■■□□□ 1.45
SIX4-203ENST00000556952 TTLL3Q9Y4R7 772 aa24.13■■□□□ 1.45
SIX4-203ENST00000556952 GOLGA8MH3BSY2 632 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 HOXC11O43248 304 aaPredicted RBP24.12■■□□□ 1.45
SIX4-203ENST00000556952 ZMPSTE24O75844 475 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 ANXA9O76027 345 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 AP2A1O95782 977 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 CYP17A1P05093 508 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 GLDCP23378 1020 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 ARF5P84085 180 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 GAD2Q05329 585 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 FCHO2Q0JRZ9 810 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 VITQ6UXI7 678 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 SLC44A3Q8N4M1 653 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 PDCD7Q8N8D1 485 aaKnown RBP24.12■■□□□ 1.45
SIX4-203ENST00000556952 FUT8Q9BYC5 575 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 POLR1EQ9GZS1 481 aaKnown RBP24.12■■□□□ 1.45
SIX4-203ENST00000556952 SLC25A51Q9H1U9 297 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 XAB2Q9HCS7 855 aaKnown RBP24.12■■□□□ 1.45
SIX4-203ENST00000556952 NT5MQ9NPB1 228 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 VPS51Q9UID3 782 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 E7ESA3 106 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 F5H423 210 aaPredicted RBP24.12■■□□□ 1.45
SIX4-203ENST00000556952 NARSO43776 548 aaKnown RBP24.12■■□□□ 1.45
SIX4-203ENST00000556952 SUN1O94901 812 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 ADH5P11766 374 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 PMS2P54278 862 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 PLEKHG6Q3KR16 790 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 INO80DQ53TQ3 878 aaPredicted RBP24.12■■□□□ 1.45
SIX4-203ENST00000556952 KCTD11Q693B1 232 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 RETSATQ6NUM9 610 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 ASIC4Q96FT7 647 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 PWWP2AQ96N64 755 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 SERPINB12Q96P63 405 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 PSKH2Q96QS6 385 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 FAM83CQ9BQN1 747 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 CINPQ9BW66 212 aaPredicted RBP24.12■■□□□ 1.45
SIX4-203ENST00000556952 SORCS3Q9UPU3 1222 aa24.12■■□□□ 1.45
SIX4-203ENST00000556952 MLNP12872 115 aa24.11■■□□□ 1.45
SIX4-203ENST00000556952 HLA-FP30511 346 aa24.11■■□□□ 1.45
SIX4-203ENST00000556952 CD70P32970 193 aa24.11■■□□□ 1.45
SIX4-203ENST00000556952 GEMP55040 296 aa24.11■■□□□ 1.45
SIX4-203ENST00000556952 TDGQ13569 410 aa24.11■■□□□ 1.45
SIX4-203ENST00000556952 DMC1Q14565 340 aa24.11■■□□□ 1.45
SIX4-203ENST00000556952 SYCP2LQ5T4T6 812 aa24.11■■□□□ 1.45
SIX4-203ENST00000556952 TRIM68Q6AZZ1 485 aa24.11■■□□□ 1.45
SIX4-203ENST00000556952 ALG1LQ6GMV1 187 aa24.11■■□□□ 1.45
SIX4-203ENST00000556952 TRMT10CQ7L0Y3 403 aaKnown RBP24.11■■□□□ 1.45
SIX4-203ENST00000556952 METTL3Q86U44 580 aaKnown RBP24.11■■□□□ 1.45
SIX4-203ENST00000556952 NXPE3Q969Y0 559 aa24.11■■□□□ 1.45
SIX4-203ENST00000556952 LRRC40Q9H9A6 602 aa24.11■■□□□ 1.45
SIX4-203ENST00000556952 VIPAS39Q9H9C1 493 aa24.11■■□□□ 1.45
SIX4-203ENST00000556952 ABCB8Q9NUT2 735 aa24.11■■□□□ 1.45
SIX4-203ENST00000556952 KIAA1549LQ6ZVL6 1849 aa24.1■■□□□ 1.45
SIX4-203ENST00000556952 MIA3Q5JRA6 1907 aa24.1■■□□□ 1.45
SIX4-203ENST00000556952 COL4A3Q01955 1670 aa24.1■■□□□ 1.45
SIX4-203ENST00000556952 DLL1O00548 723 aa24.1■■□□□ 1.45
SIX4-203ENST00000556952 SNAP91O60641 907 aa24.1■■□□□ 1.45
SIX4-203ENST00000556952 ECI2O75521 394 aa24.1■■□□□ 1.45
SIX4-203ENST00000556952 LEKR1Q6ZMV7 388 aa24.1■■□□□ 1.45
SIX4-203ENST00000556952 APCDD1Q8J025 514 aa24.1■■□□□ 1.45
SIX4-203ENST00000556952 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.1■■□□□ 1.45
SIX4-203ENST00000556952 TSEN2Q8NCE0 465 aaKnown RBP24.1■■□□□ 1.45
SIX4-203ENST00000556952 IMP4Q96G21 291 aaKnown RBP24.1■■□□□ 1.45
SIX4-203ENST00000556952 XPO6Q96QU8 1125 aaKnown RBP24.1■■□□□ 1.45
SIX4-203ENST00000556952 MGME1Q9BQP7 344 aa24.1■■□□□ 1.45
SIX4-203ENST00000556952 MLPHQ9BV36 600 aaPredicted RBP24.1■■□□□ 1.45
SIX4-203ENST00000556952 DNAJC17Q9NVM6 304 aaKnown RBP24.1■■□□□ 1.45
SIX4-203ENST00000556952 GGA2Q9UJY4 613 aa24.1■■□□□ 1.45
SIX4-203ENST00000556952 MAP2K7O14733 419 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 DCXO43602 365 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 PSMC3P17980 439 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 HSD17B3P37058 310 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 MAGEA3P43357 314 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 NUMBP49757 651 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 MPP3Q13368 585 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 PITRM1Q5JRX3 1037 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 FNBP1LQ5T0N5 605 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 ZNF534Q76KX8 674 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 YAF2Q8IY57 180 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 PGBD5Q8N414 524 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 OXNAD1Q96HP4 312 aaPredicted RBP24.09■■□□□ 1.45
SIX4-203ENST00000556952 PABPC3Q9H361 631 aaKnown RBP24.09■■□□□ 1.45
SIX4-203ENST00000556952 CDC42EP4Q9H3Q1 356 aaKnown RBP24.09■■□□□ 1.45
SIX4-203ENST00000556952 SAYSD1Q9NPB0 183 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 VPS45Q9NRW7 570 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 FBXO10Q9UK96 956 aa24.09■■□□□ 1.45
SIX4-203ENST00000556952 AP3B1O00203 1094 aa24.08■■□□□ 1.45
SIX4-203ENST00000556952 TECTAO75443 2155 aa24.08■■□□□ 1.45
SIX4-203ENST00000556952 PABPC1P11940 636 aaKnown RBP24.08■■□□□ 1.45
SIX4-203ENST00000556952 ARSAP15289 507 aa24.08■■□□□ 1.45
SIX4-203ENST00000556952 SLC20A2Q08357 652 aa24.08■■□□□ 1.45
SIX4-203ENST00000556952 ITKQ08881 620 aa24.08■■□□□ 1.45
SIX4-203ENST00000556952 PDIA2Q13087 525 aaKnown RBP24.08■■□□□ 1.45
SIX4-203ENST00000556952 GRM2Q14416 872 aa24.08■■□□□ 1.45
SIX4-203ENST00000556952 DNAJC21Q5F1R6 531 aaKnown RBP24.08■■□□□ 1.45
SIX4-203ENST00000556952 NAPEPLDQ6IQ20 393 aa24.08■■□□□ 1.45
SIX4-203ENST00000556952 LRRC8BQ6P9F7 803 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms