RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 GRIN3AQ8TCU5 1115 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 RMDN1Q96DB5 314 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 HEPHQ9BQS7 1158 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 EDEM2Q9BV94 578 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 NUSAP1Q9BXS6 441 aaKnown RBP23.27■■□□□ 1.32
TDP1-216ENST00000556867 TM6SF2Q9BZW4 377 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 PDFQ9HBH1 243 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 CAPN10Q9HC96 672 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 PRAMEF11O60813 436 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 CFIP05156 583 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 GNSP15586 552 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 CYLC1P35663 651 aaPredicted RBP23.26■■□□□ 1.31
TDP1-216ENST00000556867 PAPOLAP51003 745 aaKnown RBP23.26■■□□□ 1.31
TDP1-216ENST00000556867 ARSEP51690 589 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 CDH6P55285 790 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 TAS2R40P59535 323 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 CNTN1Q12860 1018 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 KRT81Q14533 505 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 MESDQ14696 234 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 POM121L1PQ3SYA9 428 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 AGBL4Q5VU57 503 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.26■■□□□ 1.31
TDP1-216ENST00000556867 OR2AP1Q8NGE2 309 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 OR14C36Q8NHC7 312 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 BIRC7Q96CA5 298 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 KDM4CQ9H3R0 1056 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 DLL3Q9NYJ7 618 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 EIF2B4Q9UI10 523 aaKnown RBP23.26■■□□□ 1.31
TDP1-216ENST00000556867 CDV3Q9UKY7 258 aaKnown RBP23.26■■□□□ 1.31
TDP1-216ENST00000556867 SLC6A14Q9UN76 642 aa23.26■■□□□ 1.31
TDP1-216ENST00000556867 FAM47DPA6NHR8 397 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 TMEM110-MUSTN1A8MSY1 372 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 PLK4O00444 970 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 KPNA3O00505 521 aaPredicted RBP23.25■■□□□ 1.31
TDP1-216ENST00000556867 PLRG1O43660 514 aaKnown RBP23.25■■□□□ 1.31
TDP1-216ENST00000556867 LEFTY1O75610 366 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 FSBPO95073 299 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 IGHV4-34P06331 123 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 KRT7P08729 469 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 AMPD1P23109 780 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 MAGEA1P43355 309 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 SNRPD1P62314 119 aaKnown RBP23.25■■□□□ 1.31
TDP1-216ENST00000556867 ARSIQ5FYB1 569 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 TMCO3Q6UWJ1 677 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 TMTC1Q8IUR5 882 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 C1orf216Q8TAB5 229 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 SNX19Q92543 992 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 ARRDC3Q96B67 414 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 HECAQ9UBI9 543 aaPredicted RBP23.25■■□□□ 1.31
TDP1-216ENST00000556867 UBA2Q9UBT2 640 aaPredicted RBP23.25■■□□□ 1.31
TDP1-216ENST00000556867 TPX2Q9ULW0 747 aaKnown RBP23.25■■□□□ 1.31
TDP1-216ENST00000556867 MFHAS1Q9Y4C4 1052 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 DCHS1Q96JQ0 3298 aa23.25■■□□□ 1.31
TDP1-216ENST00000556867 A0A1B0GTW7 788 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 J3KR12 359 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 RNF103O00237 685 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 SLC30A4O14863 429 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 GJC1P36383 396 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 ID4P47928 161 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 CCR5P51681 352 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 SPA17Q15506 151 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 PIP5KL1Q5T9C9 394 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 ZCCHC9Q8N567 271 aaKnown RBP23.24■■□□□ 1.31
TDP1-216ENST00000556867 PPP1R16AQ96I34 528 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 LRIG1Q96JA1 1093 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 GDAP1L1Q96MZ0 367 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 HDAC8Q9BY41 377 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 MIR1-1HGQ9H1L0 117 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 LUC7LQ9NQ29 371 aaKnown RBP23.24■■□□□ 1.31
TDP1-216ENST00000556867 DYRK4Q9NR20 520 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 ETNK2Q9NVF9 386 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 IMPACTQ9P2X3 320 aa23.24■■□□□ 1.31
TDP1-216ENST00000556867 ADAMTS9Q9P2N4 1935 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 SOWAHDA6NJG2 315 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 DFFAO00273 331 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 CD48P09326 243 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 IL4RP24394 825 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 ITGB7P26010 798 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 CD27P26842 260 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 HADHBP55084 474 aaKnown RBP23.23■■□□□ 1.31
TDP1-216ENST00000556867 RHOAP61586 193 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 CCDC15Q0P6D6 951 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 DPYSL3Q14195 570 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 PDK2Q15119 407 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 ATP13A4Q4VNC1 1196 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 ATXN7L2Q5T6C5 722 aaPredicted RBP23.23■■□□□ 1.31
TDP1-216ENST00000556867 STPG1Q5TH74 334 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 RYBPQ8N488 228 aaPredicted RBP23.23■■□□□ 1.31
TDP1-216ENST00000556867 ORAI3Q9BRQ5 295 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 ZNF670Q9BS34 389 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 ZDHHC6Q9H6R6 413 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 LHX3Q9UBR4 397 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 PCDHA13Q9Y5I0 950 aa23.23■■□□□ 1.31
TDP1-216ENST00000556867 BCAT2O15382 392 aaPredicted RBP23.22■■□□□ 1.31
TDP1-216ENST00000556867 NDUFA10O95299 355 aa23.22■■□□□ 1.31
TDP1-216ENST00000556867 POP4O95707 220 aaKnown RBP23.22■■□□□ 1.31
TDP1-216ENST00000556867 IGSF6O95976 241 aa23.22■■□□□ 1.31
TDP1-216ENST00000556867 ENGP17813 658 aa23.22■■□□□ 1.31
TDP1-216ENST00000556867 SERPINB6P35237 376 aa23.22■■□□□ 1.31
TDP1-216ENST00000556867 TAS2R38P59533 333 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms