RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 CYTH1Q15438 398 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 CSRP2Q16527 193 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 MYLK3Q32MK0 819 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 INO80DQ53TQ3 878 aaPredicted RBP17.38■□□□□ 0.37
PSEN1-217ENST00000556533 WDR45BQ5MNZ6 344 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 DCAF12L1Q5VU92 463 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 SYT12Q8IV01 421 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 RHOT1Q8IXI2 618 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 GPR161Q8N6U8 529 aaKnown RBP17.38■□□□□ 0.37
PSEN1-217ENST00000556533 C12orf50Q8NA57 414 aaPredicted RBP17.38■□□□□ 0.37
PSEN1-217ENST00000556533 TMIEQ8NEW7 156 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 CADM4Q8NFZ8 388 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 PCDH19Q8TAB3 1148 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 FAM71BQ8TC56 605 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 CASKIN2Q8WXE0 1202 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 LACRTQ9GZZ8 138 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 VPS45Q9NRW7 570 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 IPO11Q9UI26 975 aaKnown RBP17.38■□□□□ 0.37
PSEN1-217ENST00000556533 ALG6Q9Y672 507 aa17.38■□□□□ 0.37
PSEN1-217ENST00000556533 TBC1D3DA0A087WVF3 549 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 TBC1D3IA0A087WXS9 549 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 TBC1D3EA0A087X179 549 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 TBC1D3KA0A087X1G2 549 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 A0A0A6YYK5 440 aaPredicted RBP17.37■□□□□ 0.37
PSEN1-217ENST00000556533 TBC1D3FA6NER0 549 aaPredicted RBP17.37■□□□□ 0.37
PSEN1-217ENST00000556533 LRRC72A6NJI9 287 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 METTL12A8MUP2 240 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 PATE3B3GLJ2 98 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 TBC1D3LB9A6J9 549 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 RNF103O00237 685 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 LRP3O75074 770 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 PALMO75781 387 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 POP4O95707 220 aaKnown RBP17.37■□□□□ 0.37
PSEN1-217ENST00000556533 GSRP00390 522 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 CFIP05156 583 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 TBC1D3HP0C7X1 549 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 ZNF806P0C7X5 589 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 TGM1P22735 817 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 SERPINB6P35237 376 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 DRD3P35462 400 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 VAV2P52735 878 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 HADHBP55084 474 aaKnown RBP17.37■□□□□ 0.37
PSEN1-217ENST00000556533 TBC1D3GQ6DHY5 549 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 TBC1D3CQ6IPX1 549 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 TCEAL6Q6IPX3 200 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 NCEH1Q6PIU2 408 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 DAAM2Q86T65 1068 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 TBC1D3Q8IZP1 549 aaPredicted RBP17.37■□□□□ 0.37
PSEN1-217ENST00000556533 OR2AP1Q8NGE2 309 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 TCEAL3Q969E4 200 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 ARRDC3Q96B67 414 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 RNF25Q96BH1 459 aaPredicted RBP17.37■□□□□ 0.37
PSEN1-217ENST00000556533 EXOC2Q96KP1 924 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 GDAP1L1Q96MZ0 367 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 MAK16Q9BXY0 300 aaKnown RBP17.37■□□□□ 0.37
PSEN1-217ENST00000556533 PDFQ9HBH1 243 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 SALL4Q9UJQ4 1053 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 PILRBQ9UKJ0 227 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 FZD4Q9ULV1 537 aa17.37■□□□□ 0.37
PSEN1-217ENST00000556533 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.37■□□□□ 0.37
PSEN1-217ENST00000556533 USP34Q70CQ2 3546 aa17.36■□□□□ 0.37
PSEN1-217ENST00000556533 KHNYNO15037 678 aaKnown RBP17.36■□□□□ 0.37
PSEN1-217ENST00000556533 IGSF6O95976 241 aa17.36■□□□□ 0.37
PSEN1-217ENST00000556533 IL10RBQ08334 325 aa17.36■□□□□ 0.37
PSEN1-217ENST00000556533 PLA2G2CQ5R387 149 aa17.36■□□□□ 0.37
PSEN1-217ENST00000556533 LRRC38Q5VT99 294 aa17.36■□□□□ 0.37
PSEN1-217ENST00000556533 PRR23CQ6ZRP0 262 aa17.36■□□□□ 0.37
PSEN1-217ENST00000556533 ATPAF2Q8N5M1 289 aa17.36■□□□□ 0.37
PSEN1-217ENST00000556533 TPCN2Q8NHX9 752 aa17.36■□□□□ 0.37
PSEN1-217ENST00000556533 ZNF670Q9BS34 389 aa17.36■□□□□ 0.37
PSEN1-217ENST00000556533 DDX56Q9NY93 547 aaKnown RBP17.36■□□□□ 0.37
PSEN1-217ENST00000556533 EVLQ9UI08 416 aaPredicted RBP17.36■□□□□ 0.37
PSEN1-217ENST00000556533 EIF2B4Q9UI10 523 aaKnown RBP17.36■□□□□ 0.37
PSEN1-217ENST00000556533 WASF2Q9Y6W5 498 aa17.36■□□□□ 0.37
PSEN1-217ENST00000556533 EML5Q05BV3 1969 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 DOCK4Q8N1I0 1966 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 CKAP5Q14008 2032 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 MAP3K6O95382 1288 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 UGT2B4P06133 528 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 ADPRHP54922 357 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 RAD51Q06609 339 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 KIF5AQ12840 1032 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 AASDHQ4L235 1098 aaPredicted RBP17.35■□□□□ 0.37
PSEN1-217ENST00000556533 KIAA0895LQ68EN5 471 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 NCBP2-AS2Q69YL0 99 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 RFX6Q8HWS3 928 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 PLPP6Q8IY26 295 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 PQLC3Q8N755 202 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 OR2T34Q8NGX1 318 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.35■□□□□ 0.37
PSEN1-217ENST00000556533 BIRC7Q96CA5 298 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 PPP1R16AQ96I34 528 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 CINPQ9BW66 212 aaPredicted RBP17.35■□□□□ 0.37
PSEN1-217ENST00000556533 PCED1AQ9H1Q7 454 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 LHX3Q9UBR4 397 aa17.35■□□□□ 0.37
PSEN1-217ENST00000556533 A0A0U1RQJ8 604 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 MACROD2A1Z1Q3 448 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 INSIG1O15503 277 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 MFSD11O43934 449 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 GNSP15586 552 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms