RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 THP07101 528 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 PTPN1P18031 435 aaKnown RBP15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 GNAZP19086 355 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 SLC25A11Q02978 314 aaKnown RBP15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 VAC14Q08AM6 782 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 CA9Q16790 459 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 STRADAQ7RTN6 431 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 POLG2Q9UHN1 485 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 SYNCRIPO60506 623 aaKnown RBP15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 RAB27AP51159 221 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 MAP3K10Q02779 954 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 PFKFB4Q16877 469 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 FSTL4Q6MZW2 842 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 UGT3A1Q6NUS8 523 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZBTB46Q86UZ6 589 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZCCHC7Q8N3Z6 543 aaKnown RBP15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 DNAJB14Q8TBM8 379 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 VPS33AQ96AX1 596 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 DGCR6LQ9BY27 220 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 EGFL7Q9UHF1 273 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 ARF4P18085 180 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 RIOX2Q8IUF8 465 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 IGDCC3Q8IVU1 814 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 CCDC103Q8IW40 242 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 FAM126BQ8IXS8 530 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 MCRS1Q96EZ8 462 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 SYT11Q9BT88 431 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 MUC3BQ9H195 1237 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 PSMB9P28065 219 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZNF135P52742 658 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 GRIK3Q13003 919 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 SLC25A52Q3SY17 297 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZIK1Q3SY52 487 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZDHHC13Q8IUH4 622 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 TAGAPQ8N103 731 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 SNX31Q8N9S9 440 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 ITFG1Q8TB96 612 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 C1orf50Q9BV19 199 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 EXOSC4Q9NPD3 245 aaKnown RBP15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 SEMA4BQ9NPR2 832 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 CHRAC1Q9NRG0 131 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 FBXO5Q9UKT4 447 aa15.2■□□□□ 0.02
ARHGEF40-207ENST00000556399 KCNU1A8MYU2 1149 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 VPS4BO75351 444 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 KRT75O95678 551 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 SERPINH1P50454 418 aaKnown RBP15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 ADGRE1Q14246 886 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 SZRD1Q7Z422 152 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 PTGR2Q8N8N7 351 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 B3GALNT2Q8NCR0 500 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 GIPC3Q8TF64 312 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 HASPINQ8TF76 798 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 CASP10Q92851 521 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 MFSD3Q96ES6 412 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 SMARCD1Q96GM5 515 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 DNAJC1Q96KC8 554 aaKnown RBP15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 SEPT5Q99719 369 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 MIPEPQ99797 713 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 CHD4Q14839 1912 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 TUBGCP6Q96RT7 1819 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 TMEM247A6NEH6 219 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 CASTOR2A6NHX0 329 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 CRTAMO95727 393 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 GRIA1P42261 906 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 PYROXD2Q8N2H3 581 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 FAM156AQ8NDB6 213 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 AZIN2Q96A70 460 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 LIMD1Q9UGP4 676 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 ITGAXP20702 1163 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 DLG1Q12959 904 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 TRIM60Q495X7 471 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 TREML1Q86YW5 311 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 UNC5BQ8IZJ1 945 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 CCDC185Q8N715 623 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 RNF217Q8TC41 542 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 TRPC4APQ8TEL6 797 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 LPGAT1Q92604 370 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 C1orf21Q9H246 121 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZNF556Q9HAH1 456 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 C17orf102A2RUQ5 167 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 TK2O00142 265 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 NRP2O60462 931 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 TADA2AO75478 443 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 PARNO95453 639 aaKnown RBP15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZNF682O95780 498 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 AOC1P19801 751 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 MRPS5P82675 430 aaKnown RBP15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 HSDL1Q3SXM5 330 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 SLC9B1Q4ZJI4 515 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 WSCD1Q658N2 575 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 CNTD1Q8N815 330 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 DNAJB3Q8WWF6 145 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 SH3GL1Q99961 368 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 MTG1Q9BT17 334 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZNF358Q9NW07 568 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 NENFQ9UMX5 172 aa15.19■□□□□ 0.02
ARHGEF40-207ENST00000556399 ARHGEF9O43307 516 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 HS6ST1O60243 411 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 CLCN5P51795 746 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 EFEMP1Q12805 493 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms