RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 INSIG1O15503 277 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 TMCC1O94876 653 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 SEC31AO94979 1220 aaKnown RBP9.36□□□□□ -0.91
ACTN1-218ENST00000556343 KAT7O95251 611 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 IGSF6O95976 241 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 PEX11BO96011 259 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 HLA-DQB2P05538 268 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 APRTP07741 180 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 SERPINF2P08697 491 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 SRFP11831 508 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 DRD1P21728 446 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 GLDCP23378 1020 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 NFKBIAP25963 317 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 PSMB4P28070 264 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 SLC6A11P48066 632 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 CSNK1DP48730 415 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 ARL4CP56559 192 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 AP1S1P61966 158 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 ARF5P84085 180 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 ZBTB17Q13105 803 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 SEMA5AQ13591 1074 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 CYTH1Q15438 398 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 FUT11Q495W5 492 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 DNAJC21Q5F1R6 531 aaKnown RBP9.36□□□□□ -0.91
ACTN1-218ENST00000556343 NAPEPLDQ6IQ20 393 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 SDE2Q6IQ49 451 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 LINGO4Q6UY18 593 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 LEKR1Q6ZMV7 388 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 TRMT11Q7Z4G4 463 aaKnown RBP9.36□□□□□ -0.91
ACTN1-218ENST00000556343 PLPP6Q8IY26 295 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 PDIK1LQ8N165 341 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 NDUFAF2Q8N183 169 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 RYBPQ8N488 228 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-218ENST00000556343 PAF1Q8N7H5 531 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 TERB1Q8NA31 727 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 MCUQ8NE86 351 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 OR52K2Q8NGK3 314 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 TTC8Q8TAM2 541 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 ATXN2LQ8WWM7 1075 aaKnown RBP9.36□□□□□ -0.91
ACTN1-218ENST00000556343 ART4Q93070 314 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 IFT43Q96FT9 208 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 GDAP1L1Q96MZ0 367 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 MGME1Q9BQP7 344 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 FSD1LQ9BXM9 530 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 XAB2Q9HCS7 855 aaKnown RBP9.36□□□□□ -0.91
ACTN1-218ENST00000556343 SLC2A4RGQ9NR83 387 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 INTS6Q9UL03 887 aaKnown RBP9.36□□□□□ -0.91
ACTN1-218ENST00000556343 RAB21Q9UL25 225 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 HS3ST2Q9Y278 367 aa9.36□□□□□ -0.91
ACTN1-218ENST00000556343 ARIH1Q9Y4X5 557 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-218ENST00000556343 NUP210Q8TEM1 1887 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-218ENST00000556343 ESYT3A0FGR9 886 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 SPECC1L-ADORA2AF8WAN1 911 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 ARNTLO00327 626 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 EIF3HO15372 352 aaKnown RBP eCLIP9.35□□□□□ -0.91
ACTN1-218ENST00000556343 ATP9BO43861 1147 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 PPFIA2O75334 1257 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 METTL18O95568 372 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 POP4O95707 220 aaKnown RBP9.35□□□□□ -0.91
ACTN1-218ENST00000556343 AP2A1O95782 977 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 GSRP00390 522 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 MLNP12872 115 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 IL9P15248 144 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 NFKB1P19838 968 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 CD68P34810 354 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-218ENST00000556343 OPRD1P41143 372 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 MAGEA6P43360 314 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 CARSP49589 748 aaKnown RBP9.35□□□□□ -0.91
ACTN1-218ENST00000556343 SCNN1BP51168 640 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 GALK1P51570 392 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 KDSRQ06136 332 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 LAMB3Q13751 1172 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 SLMAPQ14BN4 828 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 DLG2Q15700 870 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 GEN1Q17RS7 908 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 FBXO43Q4G163 708 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 FNDC3BQ53EP0 1204 aaKnown RBP9.35□□□□□ -0.91
ACTN1-218ENST00000556343 CARD16Q5EG05 197 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 RNASEH2BQ5TBB1 312 aaKnown RBP9.35□□□□□ -0.91
ACTN1-218ENST00000556343 ASTLQ6HA08 431 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-218ENST00000556343 HIBCHQ6NVY1 386 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-218ENST00000556343 EMBQ6PCB8 327 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 CENPUQ71F23 418 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 SRLQ86TD4 932 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 PRUNE1Q86TP1 453 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 ADIPOR2Q86V24 386 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 SH2D3CQ8N5H7 860 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 CNTD1Q8N815 330 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 NAT8LQ8N9F0 302 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 GLIS1Q8NBF1 620 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 CPT1BQ92523 772 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 IMP4Q96G21 291 aaKnown RBP9.35□□□□□ -0.91
ACTN1-218ENST00000556343 SHDQ96IW2 340 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 NUDCD1Q96RS6 583 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 FMO2Q99518 471 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 SEMA3CQ99985 751 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 HINFPQ9BQA5 517 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 ADGRE3Q9BY15 652 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 CEP41Q9BYV8 373 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 MRPS17Q9Y2R5 130 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms