RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 BAIAP3O94812 1187 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 TGDSO95455 350 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 IL1BP01584 269 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 BGNP21810 368 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 ITGB8P26012 769 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 SLC6A4P31645 630 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 CD86P42081 329 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 SERPINB8P50452 374 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 MAXP61244 160 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 CREMQ03060 361 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 TWF1Q12792 350 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 SETDB1Q15047 1291 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 SMAD1Q15797 465 aaKnown RBP10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 PCSK7Q16549 785 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 DBN1Q16643 649 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 UGP2Q16851 508 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 FAM133BQ5BKY9 247 aaKnown RBP10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 RFWD3Q6PCD5 774 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 KDELC1Q6UW63 502 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 KDELC2Q7Z4H8 507 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 DNAJB7Q7Z6W7 309 aaPredicted RBP10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 GPR65Q8IYL9 337 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 TCEAL8Q8IYN2 117 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 CFAP52Q8N1V2 620 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 MICALL1Q8N3F8 863 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 BBS5Q8N3I7 341 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 ZNF398Q8TD17 642 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 PTPRN2Q92932 1015 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 ISL2Q96A47 359 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 E2F7Q96AV8 911 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 TRIM43Q96BQ3 446 aaPredicted RBP10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 ARMC5Q96C12 935 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 ZNF778Q96MU6 729 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 ZNF599Q96NL3 588 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 DDX50Q9BQ39 737 aaKnown RBP10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 TRIM55Q9BYV6 548 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 POLR1EQ9GZS1 481 aaKnown RBP10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 ATXN3LQ9H3M9 355 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 ABCF3Q9NUQ8 709 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 PCDHB12Q9Y5F1 795 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 ZFP37Q9Y6Q3 630 aaPredicted RBP10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 NYNRINQ9P2P1 1898 aaKnown RBP10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 DOCK4Q8N1I0 1966 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 HEATR9A2RTY3 570 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 KIAA0355O15063 1070 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 CLDN11O75508 207 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 DCTN3O75935 186 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 STC2O76061 302 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 MPOP05164 745 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 BPGMP07738 259 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 CORO1AP31146 461 aaKnown RBP10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 ACVRL1P37023 503 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 SCTRP47872 440 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 TMPRSS15P98073 1019 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 CCDC15Q0P6D6 951 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 PLD1Q13393 1074 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 ZNF235Q14590 738 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 ADGRF1Q5T601 910 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 TMCO4Q5TGY1 634 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 NECAB2Q7Z6G3 386 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 ITIH5Q86UX2 942 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 DCLK2Q8N568 766 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 GABPB2Q8TAK5 448 aaPredicted RBP10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 MYEOVQ96EZ4 313 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 RNF38Q9H0F5 515 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 ATP13A1Q9HD20 1204 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 SNX15Q9NRS6 342 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 SIRPGQ9P1W8 387 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 GGT7Q9UJ14 662 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 SSX2IPQ9Y2D8 614 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 CAPN7Q9Y6W3 813 aa10.23□□□□□ -0.77
EFCAB11-209ENST00000556005 COL4A6Q14031 1691 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 VAPBO95292 243 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 MMP2P08253 660 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 ACRP10323 421 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 ETFBP38117 255 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 MAGEA12P43365 314 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 SERPINH1P50454 418 aaKnown RBP10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 DSC2Q02487 901 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 GNA12Q03113 381 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 ZNF177Q13360 481 aaPredicted RBP10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 THOC5Q13769 683 aaKnown RBP10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 CCDC153Q494R4 210 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 PABPC1LQ4VXU2 614 aaKnown RBP10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 N4BP2L1Q5TBK1 243 aaPredicted RBP10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 IL31Q6EBC2 164 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 ESRP1Q6NXG1 681 aaKnown RBP10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 CHST9Q7L1S5 443 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 SETD3Q86TU7 594 aaPredicted RBP10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 HERC6Q8IVU3 1022 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 CNTN4Q8IWV2 1026 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 FITM2Q8N6M3 262 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 ARRDC2Q8TBH0 407 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 THOC1Q96FV9 657 aaKnown RBP10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 ATXN7L3BQ96GX2 97 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 RMDN2Q96LZ7 410 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 LRRC37BQ96QE4 947 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 RANBP9Q96S59 729 aa10.22□□□□□ -0.77
EFCAB11-209ENST00000556005 KLF16Q9BXK1 252 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms