RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 RNF207Q6ZRF8 634 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 SLC29A4Q7RTT9 530 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 GSTA5Q7RTV2 222 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 MRGPREQ86SM8 312 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 RHPN2Q8IUC4 686 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 C16orf71Q8IYS4 520 aaPredicted RBP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 PAQR4Q8N4S7 273 aaPredicted RBP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 AMER2Q8N7J2 671 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 OR52N4Q8NGI2 321 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 ACTRT2Q8TDY3 377 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 CACTINQ8WUQ7 758 aaKnown RBP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 GTF3C6Q969F1 213 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 PGAM5Q96HS1 289 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 CNDP2Q96KP4 475 aaKnown RBP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 COQ10AQ96MF6 247 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 ZNF830Q96NB3 372 aaPredicted RBP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 C8orf49Q96NF6 230 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 WDFY2Q96P53 400 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 TEFMQ96QE5 360 aaKnown RBP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 FRG2BQ96QU4 278 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 ZNF347Q96SE7 839 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 PAIP2Q9BPZ3 127 aaKnown RBP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 H2AFJQ9BTM1 129 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 MLST8Q9BVC4 326 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 IFT27Q9BW83 186 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 GATA5Q9BWX5 397 aaPredicted RBP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 TEX12Q9BXU0 123 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 ALDH8A1Q9H2A2 487 aaPredicted RBP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 POLR1BQ9H9Y6 1135 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 PDE7BQ9NP56 450 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 SPATS2LQ9NUQ6 558 aaKnown RBP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 ARL8BQ9NVJ2 186 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 TMEM51Q9NW97 253 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 SUCLA2Q9P2R7 463 aaPredicted RBP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 FBXO40Q9UH90 709 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 ZHX1Q9UKY1 873 aaPredicted RBP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 MKLN1Q9UL63 735 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 ODF2LQ9ULJ1 636 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 A4GNTQ9UNA3 340 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 MTMR6Q9Y217 621 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 FANCIQ9NVI1 1328 aa3.18□□□□□ -1.9
MTHFD1-212ENST00000555858 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 TCRBV7S3A2A0A539 114 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 TAF4O00268 1085 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 LIASO43766 372 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 HMMRO75330 724 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 SEC31AO94979 1220 aaKnown RBP3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 IPO7O95373 1038 aaKnown RBP3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 ESRRBO95718 433 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 HEXAP06865 529 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 CYP2D6P10635 497 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 GLULP15104 373 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 SAT1P21673 171 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 IDUAP35475 653 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 DPP6P42658 865 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 TXKP42681 527 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 GNAQP50148 359 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 HOXA4Q00056 320 aaPredicted RBP3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 TAP1Q03518 808 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 CEBPZQ03701 1054 aaKnown RBP3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 SLC14A1Q13336 389 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 TUBA3CQ13748 450 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 KPNB1Q14974 876 aaKnown RBP3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 PLCB4Q15147 1175 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 TMEM266Q2M3C6 531 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 FAM153CQ494X1 144 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 PLK5Q496M5 336 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 FAM171A1Q5VUB5 890 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 TMEM268Q5VZI3 342 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 TXNDC8Q6A555 127 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 CEP85Q6P2H3 762 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 TUBA3EQ6PEY2 450 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 MOB3CQ70IA8 216 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 GPAT4Q86UL3 456 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 TICAM1Q8IUC6 712 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 UEVLDQ8IX04 471 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 SCML4Q8N228 414 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 FAM47BQ8NA70 645 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 ZFPM2Q8WW38 1151 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 PSPC1Q8WXF1 523 aaKnown RBP3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 LINC00476Q8WZB0 136 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 DVL3Q92997 716 aaPredicted RBP3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 ZNF764Q96H86 408 aaPredicted RBP3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 CCDC34Q96HJ3 373 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 C1orf74Q96LT6 269 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 BBC3Q96PG8 261 aaPredicted RBP3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 MACROD1Q9BQ69 325 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 GLIS2Q9BZE0 524 aaPredicted RBP3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 SLC2A4RGQ9NR83 387 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 RRP7BPQ9NSQ0 103 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 ATP8A2Q9NTI2 1148 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 SYBUQ9NX95 663 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 SMPD4Q9NXE4 827 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 CWC25Q9NXE8 425 aaPredicted RBP3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 GRHL1Q9NZI5 618 aa3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 MRPL15Q9P015 296 aaKnown RBP3.17□□□□□ -1.9
MTHFD1-212ENST00000555858 NLKQ9UBE8 527 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms