RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 ASAP2O43150 1006 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 PPP1R3DO95685 299 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 DDAH2O95865 285 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 ENO3P13929 434 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-216ENST00000555550 PNPLA4P41247 253 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 CLCN5P51795 746 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 PRKAA2P54646 552 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 ABATP80404 500 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 Q0VFX4 171 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 SYTL3Q4VX76 610 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 TANGO2Q6ICL3 276 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 CCDC174Q6PII3 467 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 ARMC9Q7Z3E5 817 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 SERPINA11Q86U17 422 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 FJX1Q86VR8 437 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 SPICE1Q8N0Z3 855 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 SCAIQ8N9R8 606 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 MIGA1Q8NAN2 632 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 OR14A16Q8NHC5 309 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 TEFMQ96QE5 360 aaKnown RBP4.07□□□□□ -1.76
SCFD1-216ENST00000555550 DDX23Q9BUQ8 820 aaKnown RBP4.07□□□□□ -1.76
SCFD1-216ENST00000555550 SAYSD1Q9NPB0 183 aa4.07□□□□□ -1.76
SCFD1-216ENST00000555550 CLEC18AA5D8T8 446 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 SRRM3A6NNA2 597 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-216ENST00000555550 SMTNL1A8MU46 457 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 KIF1CO43896 1103 aaKnown RBP4.06□□□□□ -1.76
SCFD1-216ENST00000555550 GLUD1P00367 558 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 MMP3P08254 477 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 CST5P28325 142 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-216ENST00000555550 AVPR2P30518 371 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 CHKAP35790 457 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 GLUD2P49448 558 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 AARSP49588 968 aaKnown RBP eCLIP4.06□□□□□ -1.76
SCFD1-216ENST00000555550 GOLGA8FQ08AF8 430 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 FOXO1Q12778 655 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 OS9Q13438 667 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-216ENST00000555550 MORC3Q14149 939 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 SHBQ15464 509 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 SMAD1Q15797 465 aaKnown RBP4.06□□□□□ -1.76
SCFD1-216ENST00000555550 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 SPSB3Q6PJ21 355 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.06□□□□□ -1.76
SCFD1-216ENST00000555550 FAM83HQ6ZRV2 1179 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-216ENST00000555550 MON1BQ7L1V2 547 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 GALNT15Q8N3T1 639 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 SAMD3Q8N6K7 520 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 CLEC18CQ8NCF0 446 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 HDAC7Q8WUI4 952 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 ADAMTS14Q8WXS8 1223 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 RBM17Q96I25 401 aaKnown RBP4.06□□□□□ -1.76
SCFD1-216ENST00000555550 LHPPQ9H008 270 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 CHODLQ9H9P2 273 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 SEL1LQ9UBV2 794 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 SRP68Q9UHB9 627 aaKnown RBP4.06□□□□□ -1.76
SCFD1-216ENST00000555550 OSGIN2Q9Y236 505 aa4.06□□□□□ -1.76
SCFD1-216ENST00000555550 WDR81Q562E7 1941 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 MST1RQ04912 1400 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 SERINC4A6NH21 518 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 IPO5O00410 1097 aaKnown RBP4.05□□□□□ -1.76
SCFD1-216ENST00000555550 LDB2O43679 373 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 ITM2AO43736 263 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 METTL18O95568 372 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 ZBTB11O95625 1053 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-216ENST00000555550 IL1AP01583 271 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 CSF1P09603 554 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 ARSAP15289 507 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 NAGAP17050 411 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 DPP6P42658 865 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 MCM2P49736 904 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 NUDT6P53370 316 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 ARHGAP8P85298 464 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 EEF1A2Q05639 463 aaKnown RBP4.05□□□□□ -1.76
SCFD1-216ENST00000555550 TRAF2Q12933 501 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 COASYQ13057 564 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 CUL4BQ13620 913 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 THOC5Q13769 683 aaKnown RBP4.05□□□□□ -1.76
SCFD1-216ENST00000555550 BYSLQ13895 437 aaKnown RBP4.05□□□□□ -1.76
SCFD1-216ENST00000555550 PRKG1Q13976 671 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 HNF4GQ14541 408 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 PLCB4Q15147 1175 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 PDCD2Q16342 344 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-216ENST00000555550 HLFQ16534 295 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 MRGPRG-AS1Q2M3A8 158 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 AP5B1Q2VPB7 878 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 ZNF284Q2VY69 593 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 JMJD6Q6NYC1 403 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-216ENST00000555550 RASGRP2Q7LDG7 609 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 C16orf82Q7Z2V1 217 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 ZDHHC23Q8IYP9 409 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 NCSTNQ92542 709 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 ATOH1Q92858 354 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-216ENST00000555550 KTI12Q96EK9 354 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-216ENST00000555550 G6PC2Q9NQR9 355 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 IL36RNQ9UBH0 155 aa4.05□□□□□ -1.76
SCFD1-216ENST00000555550 hCG_1642624A0A1W2PR95 340 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 TARSL2A2RTX5 802 aaKnown RBP4.04□□□□□ -1.76
SCFD1-216ENST00000555550 OR6C68A6NDL8 312 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 HBP1O60381 514 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 CLDN7O95471 211 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 YWHAQP27348 245 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms