RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 PNPOQ9NVS9 261 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 CD274Q9NZQ7 290 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 MTO1Q9Y2Z2 717 aaKnown RBP12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 DOCK5Q9H7D0 1870 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 FCHO1O14526 889 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 SPAG6O75602 509 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 SLC2A3P11169 496 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 CCND1P24385 295 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 SLC11A1P49279 550 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 VEGFBP49765 207 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 SERPINB9P50453 376 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 UBAP2LQ14157 1087 aaKnown RBP12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 TRIM60Q495X7 471 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 MON1AQ86VX9 555 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 C10orf107Q8IVU9 208 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 RIBC1Q8N443 379 aaPredicted RBP12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 NAT8LQ8N9F0 302 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 PIP4K2CQ8TBX8 421 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 ULK4Q96C45 1275 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 ACBD6Q9BR61 282 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 SLC2A6Q9UGQ3 507 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 TK2O00142 265 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 TBL1XO60907 577 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 IVDP26440 423 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 ZBTB17Q13105 803 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 SEMA5AQ13591 1074 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 FAM83EQ2M2I3 478 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 SPDYAQ5MJ70 313 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 C6orf10Q5SRN2 563 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 KIAA0319Q5VV43 1072 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 ACAD11Q709F0 780 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 ARHGAP22Q7Z5H3 698 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 LCA5Q86VQ0 697 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 GBP7Q8N8V2 638 aaPredicted RBP12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.4□□□□□ -0.438e-10■■■□□ 17.6
ARHGEF40-206ENST00000555232 FAM210AQ96ND0 272 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 TNKS2Q9H2K2 1166 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 GJD2Q9UKL4 321 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 DERAQ9Y315 318 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 KCTD3Q9Y597 815 aa12.4□□□□□ -0.43
ARHGEF40-206ENST00000555232 PFDN6O15212 129 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 CCL16O15467 120 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 TOMM70O94826 608 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 PGAM1P18669 254 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 EPHA3P29320 983 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 EPHB3P54753 998 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 TPD52P55327 224 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 USP46P62068 366 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 LACTB2Q53H82 288 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 TCHHL1Q5QJ38 904 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 HECTD3Q5T447 861 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 TMCO4Q5TGY1 634 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 MFN1Q8IWA4 741 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 C12orf50Q8NA57 414 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 FBXO22Q8NEZ5 403 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 TBATAQ96M53 351 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 LMCD1Q9NZU5 365 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 PER2O15055 1255 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 SCAMP1O15126 338 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 MTSS1O43312 755 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 S100BP04271 92 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 CYBBP04839 570 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 CCDC166P0CW27 439 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 SLC1A6P48664 564 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 ROR2Q01974 943 aaKnown RBP12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 GALNTL6Q49A17 601 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 RNF19BQ6ZMZ0 732 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 FITM2Q8N6M3 262 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 ZYG11BQ9C0D3 744 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 FESP07332 822 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 WARSP23381 471 aaKnown RBP12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 GKP32189 559 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 PTPN9P43378 593 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 NUDT2P50583 147 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 UPP1Q16831 310 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 ALFQ53S48 1182 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 PACS1Q6VY07 963 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 SZRD1Q7Z422 152 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 PPP1R10Q96QC0 940 aaKnown RBP12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 NFKBIZQ9BYH8 718 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 CRLS1Q9UJA2 301 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 FBXW11Q9UKB1 542 aa12.39□□□□□ -0.43
ARHGEF40-206ENST00000555232 FAM95CA0A1B0GW59 222 aa12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 H7C4K7 107 aa12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 C2P06681 752 aa12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 CORO1AP31146 461 aaKnown RBP12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 NNMTP40261 264 aa12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 USP41Q3LFD5 358 aa12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 NPWQ8N729 165 aa12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 DRAXINQ8NBI3 349 aaPredicted RBP12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 SNX15Q9NRS6 342 aa12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 RGS18Q9NS28 235 aa12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 CFAP73A6NFT4 308 aa12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 ENTPD5O75356 428 aa12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 PIGNO95427 931 aa12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 C1RP00736 705 aa12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 CYBAP13498 195 aa12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 KCNE1P15382 129 aa12.38□□□□□ -0.43
ARHGEF40-206ENST00000555232 CSF2RAP15509 400 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms