RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CNPP09543 421 aaKnown RBP5.66□□□□□ -1.5
VRK1-203ENST00000555067 HOXB2P14652 356 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 KCNJ4P48050 445 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 AGTR2P50052 363 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 GALNT2Q10471 571 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 EIF4A2Q14240 407 aaKnown RBP5.66□□□□□ -1.5
VRK1-203ENST00000555067 PGM5Q15124 567 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 CTXN3Q4LDR2 81 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 KRTAP5-4Q6L8H1 288 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 RPUSD3Q6P087 351 aaKnown RBP5.66□□□□□ -1.5
VRK1-203ENST00000555067 ZNF474Q6S9Z5 364 aaPredicted RBP5.66□□□□□ -1.5
VRK1-203ENST00000555067 C18orf65Q6ZTR6 163 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 KRT74Q7RTS7 529 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 GALNT13Q8IUC8 556 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 FAM47BQ8NA70 645 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 ASB5Q8WWX0 329 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 GRAMD1AQ96CP6 724 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 ZNF479Q96JC4 524 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 CDHR1Q96JP9 859 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 YME1L1Q96TA2 773 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 RBM38Q9H0Z9 239 aaKnown RBP5.66□□□□□ -1.5
VRK1-203ENST00000555067 NOD2Q9HC29 1040 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 PCDHGB4Q9UN71 923 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 PROCRQ9UNN8 238 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 RRP7AQ9Y3A4 280 aaKnown RBP5.66□□□□□ -1.5
VRK1-203ENST00000555067 SNX5Q9Y5X3 404 aa5.66□□□□□ -1.5
VRK1-203ENST00000555067 C4orf47A7E2U8 309 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 GJB3O75712 270 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 NTSR2O95665 410 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 HSPA4LO95757 839 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 GLP2RO95838 553 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 VIPP01282 170 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 NGFRP08138 427 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 CLTBP09497 229 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 KLRK1P26718 216 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 CLK1P49759 484 aaKnown RBP5.65□□□□□ -1.5
VRK1-203ENST00000555067 CBFBQ13951 182 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 BAK1Q16611 211 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 ZNF585BQ52M93 769 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 PIK3CD-AS1Q5SR53 167 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 C6orf10Q5SRN2 563 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 NUGGCQ68CJ6 796 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 LRIG3Q6UXM1 1119 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 ARMC8Q8IUR7 673 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 LPAR1Q92633 364 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 C3orf49Q96BT1 292 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 CLMNQ96JQ2 1002 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 MXD3Q9BW11 206 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 USP44Q9H0E7 712 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 EIF2B3Q9NR50 452 aaKnown RBP5.65□□□□□ -1.5
VRK1-203ENST00000555067 RPS6KA6Q9UK32 745 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 ZHX1Q9UKY1 873 aaPredicted RBP5.65□□□□□ -1.5
VRK1-203ENST00000555067 DNAJC16Q9Y2G8 782 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 DERAQ9Y315 318 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 PIAS3Q9Y6X2 628 aa5.65□□□□□ -1.5
VRK1-203ENST00000555067 DPPA5A6NC42 116 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 SMTNL1A8MU46 457 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 SLC28A2O43868 658 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 ACADMP11310 421 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 ALADP13716 330 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 MUTP22033 750 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 MLH1P40692 756 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 ALDH18A1P54886 795 aaKnown RBP5.64□□□□□ -1.51
VRK1-203ENST00000555067 PLIN5Q00G26 463 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 NSUN2Q08J23 767 aaKnown RBP eCLIP5.64□□□□□ -1.51
VRK1-203ENST00000555067 WTAPQ15007 396 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 ANKRD1Q15327 319 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 BTBD16Q32M84 506 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 SLC22A25Q6T423 547 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 PIK3AP1Q6ZUJ8 805 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 FAM47EQ6ZV65 393 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 H1FNTQ75WM6 255 aaPredicted RBP5.64□□□□□ -1.51
VRK1-203ENST00000555067 CPLX4Q7Z7G2 160 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 DDIASQ8IXT1 998 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 FBXL14Q8N1E6 418 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 RSC1A1Q92681 617 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 ATP2A3Q93084 1043 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 MEIS3Q99687 375 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 ADPGKQ9BRR6 497 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 ITPAQ9BY32 194 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 SIL1Q9H173 461 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 SLCO5A1Q9H2Y9 848 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 TASP1Q9H6P5 420 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 G6PC2Q9NQR9 355 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 ATP8A2Q9NTI2 1148 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 SEPT11Q9NVA2 429 aaKnown RBP5.64□□□□□ -1.51
VRK1-203ENST00000555067 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.64□□□□□ -1.51
VRK1-203ENST00000555067 HSF4Q9ULV5 492 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 NAALADL1Q9UQQ1 740 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 ZNF711Q9Y462 761 aa5.64□□□□□ -1.51
VRK1-203ENST00000555067 STX16-NPEPL1H3BU86 382 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 STX16O14662 325 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 SCGB1D1O95968 90 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 ANXA6P08133 673 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 IL11P20809 199 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 ARRB2P32121 409 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 CREB5Q02930 508 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 PPP2R5CQ13362 524 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 ACVR2BQ13705 512 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 RASA2Q15283 850 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms