RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 GJA8P48165 433 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 RIN1Q13671 783 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 KLHDC7AQ5VTJ3 777 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 CHERPQ8IWX8 916 aaKnown RBP6.96□□□□□ -1.3
SYNE2-216ENST00000555002 OR6Y1Q8NGX8 325 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 ROPN1BQ9BZX4 212 aaPredicted RBP6.96□□□□□ -1.3
SYNE2-216ENST00000555002 ROPN1Q9HAT0 212 aaPredicted RBP6.96□□□□□ -1.3
SYNE2-216ENST00000555002 CLIC5Q9NZA1 410 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 ISM1B1AKI9 464 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 MRASO14807 208 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 ALDH3A2P51648 485 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 CARTPTQ16568 116 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 SHC4Q6S5L8 630 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 DENND6BQ8NEG7 585 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 ZFP28Q8NHY6 868 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 UBE2E3Q969T4 207 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 SEMA4BQ9NPR2 832 aaPredicted RBP6.96□□□□□ -1.3
SYNE2-216ENST00000555002 NUDT5Q9UKK9 219 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 IKZF3Q9UKT9 509 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 ALG6Q9Y672 507 aa6.96□□□□□ -1.3
SYNE2-216ENST00000555002 CLASP1Q7Z460 1538 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 RGL2O15211 777 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 PRH1P02810 166 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 RB1P06400 928 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 SERPINA4P29622 427 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 CD86P42081 329 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 AMZ1Q400G9 498 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 SAMD4BQ5PRF9 694 aaKnown RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 PRSS58Q8IYP2 241 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 EMC1Q8N766 993 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 ACTRT2Q8TDY3 377 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 ERP44Q9BS26 406 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 TMEM5Q9Y2B1 443 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 MRPS23Q9Y3D9 190 aaKnown RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 PCP4L1A6NKN8 68 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 PCCBP05166 539 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 GCLCP48506 637 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 ELAVL2Q12926 359 aaKnown RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 TBX2Q13207 712 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 SLC29A2Q14542 456 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 NFE2Q16621 373 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 METTL16Q86W50 562 aaKnown RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 FAM129CQ86XR2 697 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 SLC41A1Q8IVJ1 513 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 BPIFB6Q8NFQ5 453 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 KANSL3Q9P2N6 904 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 UGGT1Q9NYU2 1555 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 CYP11B1P15538 503 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 TAL1P17542 331 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 MTTPP55157 894 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 LAMTOR4Q0VGL1 99 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 SP140Q13342 867 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 TOP3AQ13472 1001 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 XKR6Q5GH73 641 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 CCNYL2Q5T2Q4 361 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 SNX32Q86XE0 403 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 RIBC1Q8N443 379 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 TOP1MTQ969P6 601 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 ZIM3Q96PE6 472 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 APBA2Q99767 749 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 UGT2B28Q9BY64 529 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 PLEKHA1Q9HB21 404 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 ZFP14Q9HCL3 533 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 WHRNQ9P202 907 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 CROTQ9UKG9 612 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 USP6P35125 1406 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 METP08581 1390 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 SEPT4O43236 478 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 SEC24CP53992 1094 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 POLR2LP62875 67 aaKnown RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 MBTD1Q05BQ5 628 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 FMR1Q06787 632 aaKnown RBP eCLIP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 PPIDQ08752 370 aaKnown RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 FAM187BQ17R55 369 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 TRIM40Q6P9F5 258 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 RAB11FIP2Q7L804 512 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 DENND1CQ8IV53 801 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 ANKRD13AQ8IZ07 590 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 BHLHE22Q8NFJ8 381 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 PHF10Q8WUB8 498 aaKnown RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 MARCH2Q9P0N8 246 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 PTPRTO14522 1441 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 GALNT3Q14435 633 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 ZNF697Q5TEC3 545 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 ADAM7Q9H2U9 754 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 VCPKMTQ9H867 229 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 UXTQ9UBK9 157 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 GSTK1Q9Y2Q3 226 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 BDNFP23560 247 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 RASGRP2Q7LDG7 609 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 PAGE2Q7Z2X7 111 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 TPCN2Q8NHX9 752 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 SMURF1Q9HCE7 757 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 OSER1Q9NX31 292 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 QRICH2Q9H0J4 1663 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 CTPS1P17812 591 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 PGAM1P18669 254 aa6.95□□□□□ -1.3
SYNE2-216ENST00000555002 CTSOP43234 321 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-216ENST00000555002 MYL6P60660 151 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms