RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956		M0R3H8	397 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	SNX2	O60749	519 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	CD4	P01730	458 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	CELA2A	P08217	269 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	APEH	P13798	732 aa	Known RBP	5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	FOSL2	P15408	326 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	COPB2	P35606	906 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	COPA	P53621	1224 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	PSMC6	P62333	389 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	GRAMD1B	Q3KR37	738 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	C10orf62	Q5T681	223 aa	Predicted RBP	5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	CCDC174	Q6PII3	467 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	ZNF444	Q8N0Y2	327 aa	Predicted RBP	5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	OR2C3	Q8N628	320 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	ACRBP	Q8NEB7	543 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	C5orf34	Q96MH7	638 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	ASB2	Q96Q27	587 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	TRPV6	Q9H1D0	765 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	ABHD16B	Q9H3Z7	469 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	TRIM36	Q9NQ86	728 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	SNX15	Q9NRS6	342 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	RNF146	Q9NTX7	359 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	MYO1A	Q9UBC5	1043 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	MGAT4C	Q9UBM8	478 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	FEM1B	Q9UK73	627 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	EYS	Q5T1H1	3165 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	FRMPD3	Q5JV73	1810 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	PLIN4	Q96Q06	1357 aa		5.78	□□□□□ -1.48
PSMC6-208	ENST00000554956	SMCHD1	A6NHR9	2005 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	SPTBN5	Q9NRC6	3674 aa	Known RBP	5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956		A0A0U1RQG5	324 aa	Predicted RBP	5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	CLCA1	A8K7I4	914 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	POC1B-GALNT4	F8VUJ3	575 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	ZFY	P08048	801 aa	Predicted RBP	5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	TSPY3	P0CV98	308 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	TSPY8	P0CW00	308 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	HARS	P12081	509 aa	Known RBP	5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	MYOG	P15173	224 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	EPHB2	P29323	1055 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	SLC16A2	P36021	539 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	SLC1A4	P43007	532 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	NOV	P48745	357 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	OAZ1	P54368	228 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	TNFAIP2	Q03169	654 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	ZRSR2	Q15696	482 aa	Known RBP	5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	HIBCH	Q6NVY1	386 aa	Predicted RBP	5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	MZT2A	Q6P582	158 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	FBXO16	Q8IX29	292 aa	Predicted RBP	5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	FSTL5	Q8N475	847 aa	Predicted RBP	5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	GALNT4	Q8N4A0	578 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	ZDHHC12	Q96GR4	267 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	FAM227B	Q96M60	508 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	GLT1D1	Q96MS3	346 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	QTRT1	Q9BXR0	403 aa	Known RBP	5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	KRTAP17-1	Q9BYP8	105 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	ACAD9	Q9H845	621 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	CYP39A1	Q9NYL5	469 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	NKX1-2	Q9UD57	310 aa	Predicted RBP	5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	STEAP1	Q9UHE8	339 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	DAAM1	Q9Y4D1	1078 aa		5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	BAZ2A	Q9UIF9	1905 aa	Known RBP	5.77	□□□□□ -1.49
PSMC6-208	ENST00000554956	TTC28	Q96AY4	2481 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	GREB1L	Q9C091	1923 aa	Predicted RBP	5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956		A0A0D9SFI3	127 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	DNAJC9-AS1	A6NH13	148 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	ADAMTS3	O15072	1205 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	TMPRSS11D	O60235	418 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	GCAT	O75600	419 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	NDST3	O95803	873 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	AR	P10275	920 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	CYP2A6	P11509	494 aa	Predicted RBP	5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	TNFSF4	P23510	183 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	PAX3	P23760	479 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	STAT2	P52630	851 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	CCL23	P55773	120 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	ITGA7	Q13683	1181 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	BAAT	Q14032	418 aa	Predicted RBP	5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	FAM187B	Q17R55	369 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	GRHL2	Q6ISB3	625 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	XRRA1	Q6P2D8	792 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	TLK2	Q86UE8	772 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	ZNF589	Q86UQ0	364 aa	Predicted RBP	5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	LINC01465	Q8N7H1	131 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	PPM1E	Q8WY54	764 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	HERVK_113	Q902F9	699 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	FSD1	Q9BTV5	496 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	MAGEB5	Q9BZ81	275 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	NAPB	Q9H115	298 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	CPVL	Q9H3G5	476 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	FBXO40	Q9UH90	709 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	ISY1	Q9ULR0	285 aa	Known RBP	5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	STX8	Q9UNK0	236 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	PRUNE2	Q8WUY3	3088 aa		5.76	□□□□□ -1.49
PSMC6-208	ENST00000554956	TTC41P	Q6P2S7	1318 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	EPOP	A6NHQ4	379 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	TSPY2	A6NKD2	308 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956		A8MVJ9	347 aa		5.75	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms