RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 ADAM23O75077 832 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 ZNF821O75541 412 aaPredicted RBP16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 PDGFBP01127 241 aaPredicted RBP16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 EPHX1P07099 455 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 C7P10643 843 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 HOXB2P14652 356 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 VAV1P15498 845 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 PRKCHP24723 683 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 RBL1P28749 1068 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 MAPK8P45983 427 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 FNTAP49354 379 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 CKAP4Q07065 602 aaKnown RBP16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 TEX44Q53QW1 395 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 ALG1LQ6GMV1 187 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 LEKR1Q6ZMV7 388 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 Q6ZS52 159 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 OR2AP1Q8NGE2 309 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 PBXIP1Q96AQ6 731 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 RTP4Q96DX8 246 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 GDAP1L1Q96MZ0 367 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 FAM118BQ9BPY3 351 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 MGME1Q9BQP7 344 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 AP1M1Q9BXS5 423 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 RBM22Q9NW64 420 aaKnown RBP eCLIP16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 DLGAP2Q9P1A6 1054 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 ZNF148Q9UQR1 794 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 ACTL7AQ9Y615 435 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 MUC3AQ02505 3323 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 MYO18AQ92614 2054 aaKnown RBP16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 WASH3PC4AMC7 463 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 SGK1O00141 431 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 PHF2O75151 1096 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 IGSF6O95976 241 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 JCHAINP01591 159 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 CHRNA3P32297 505 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 DGKEP52429 567 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 WASHC5Q12768 1159 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 GAS6Q14393 721 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 ELAVL3Q14576 367 aaKnown RBP16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 GRM3Q14832 879 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 CRY1Q16526 586 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 CARD16Q5EG05 197 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 C9orf64Q5T6V5 341 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 Q6ZVU0 165 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 ZNF572Q7Z3I7 529 aaPredicted RBP16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 DSG4Q86SJ6 1040 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 FBXL6Q8N531 539 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 TSEN2Q8NCE0 465 aaKnown RBP16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 OR2A12Q8NGT7 310 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 MAGOHBQ96A72 148 aaKnown RBP16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 LRIG1Q96JA1 1093 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 TEKT5Q96M29 485 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 RUNDC3BQ96NL0 473 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 POLR1EQ9GZS1 481 aaKnown RBP16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 SMARCAL1Q9NZC9 954 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 LHX3Q9UBR4 397 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 ATP8A1Q9Y2Q0 1164 aa16.7■□□□□ 0.26
SPTLC2-203ENST00000554901 ANTXRLA6NF34 631 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 C5orf60A6NFR6 353 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 RNF103O00237 685 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 KCNN4O15554 427 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 OPHN1O60890 802 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 POP4O95707 220 aaKnown RBP16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 DCNP07585 359 aaKnown RBP16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 HLA-EP13747 358 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 PTPN3P26045 913 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 RAD51Q06609 339 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 ZBTB17Q13105 803 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 ATL2Q8NHH9 583 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 TMEM121Q9BTD3 319 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 EPHX3Q9H6B9 360 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 CD248Q9HCU0 757 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 ZDHHC4Q9NPG8 344 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 PRSS16Q9NQE7 514 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 SEPT10Q9P0V9 454 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 MRFAP1Q9Y605 127 aa16.69■□□□□ 0.26
SPTLC2-203ENST00000554901 A0A1W2PQF6 199 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 PDE2AO00408 941 aaPredicted RBP16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 SIN3BO75182 1162 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 GCATO75600 419 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 PAPSS2O95340 614 aaPredicted RBP16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 CR2P20023 1033 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 COILP38432 576 aaPredicted RBP16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 WASP42768 502 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 CCR3P51677 355 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 AP1S1P61966 158 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 SNX1Q13596 522 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 ITPRIPL1Q6GPH6 555 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 PKN3Q6P5Z2 889 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 CNTD1Q8N815 330 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 OR2T3Q8NH03 318 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 GRK7Q8WTQ7 553 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 LRRN4Q8WUT4 740 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 OR8D1Q8WZ84 308 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 ZNF419Q96HQ0 510 aaPredicted RBP16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 SPATA13Q96N96 652 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 PPP1R2P1Q96PQ5 205 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 NUDCD1Q96RS6 583 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 TUBGCP5Q96RT8 1024 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 CPEB1Q9BZB8 566 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms