RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 EIF3CLB5ME19 914 aaKnown RBP10.86□□□□□ -0.67
SHMT2-213ENST00000554600 KRIT1O00522 736 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 TM4SF5O14894 197 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 SLC7A4O43246 635 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 KDELR3O43731 214 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 AKR1B10O60218 316 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 LEFTY1O75610 366 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 PCDH8O95206 1070 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 KCNK5O95279 499 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 CER1O95813 267 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 IGHV4-34P06331 123 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 HTR7P34969 479 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 GJC1P36383 396 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 CCR5P51681 352 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 CCNHP51946 323 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-213ENST00000554600 ADKP55263 362 aaKnown RBP10.86□□□□□ -0.67
SHMT2-213ENST00000554600 YBEYP58557 167 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-213ENST00000554600 RHOAP61586 193 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 SNRPD1P62314 119 aaKnown RBP10.86□□□□□ -0.67
SHMT2-213ENST00000554600 PPP2CBP62714 309 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 PPP2CAP67775 309 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 SEMA3BQ13214 749 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 PIGHQ14442 188 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-213ENST00000554600 SMTNL2Q2TAL5 461 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 PARP15Q460N3 678 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 PRPF39Q86UA1 669 aaKnown RBP10.86□□□□□ -0.67
SHMT2-213ENST00000554600 ARFGAP1Q8N6T3 406 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 NETO2Q8NC67 525 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 TMIEQ8NEW7 156 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 CTNNBL1Q8WYA6 563 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-213ENST00000554600 ARRDC3Q96B67 414 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 ARHGEF26Q96DR7 871 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 CELF6Q96J87 481 aaKnown RBP10.86□□□□□ -0.67
SHMT2-213ENST00000554600 BTBD6Q96KE9 485 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 SLC6A18Q96N87 628 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 EIF3CQ99613 913 aaKnown RBP10.86□□□□□ -0.67
SHMT2-213ENST00000554600 SLC32A1Q9H598 525 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 NOL6Q9H6R4 1146 aaKnown RBP10.86□□□□□ -0.67
SHMT2-213ENST00000554600 GAREM1Q9H706 876 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 CTTNBP2NLQ9P2B4 639 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 HECAQ9UBI9 543 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-213ENST00000554600 IP6K2Q9UHH9 426 aa10.86□□□□□ -0.67
SHMT2-213ENST00000554600 ARID1BQ8NFD5 2236 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-213ENST00000554600 A0A1W2PPC4 97 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 ARHGAP42A6NI28 874 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 TMEM110-MUSTN1A8MSY1 372 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 WASH4PA8MWX3 477 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 H3BRJ5 948 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 MYO1FO00160 1098 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 DFFAO00273 331 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 GIPC1O14908 333 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 PLRG1O43660 514 aaKnown RBP10.85□□□□□ -0.67
SHMT2-213ENST00000554600 RNGTTO60942 597 aaKnown RBP10.85□□□□□ -0.67
SHMT2-213ENST00000554600 TMCC1O94876 653 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 CYP1A2P05177 515 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 ARL4AP40617 200 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 GRIA4P48058 902 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 RACK1P63244 317 aaKnown RBP10.85□□□□□ -0.67
SHMT2-213ENST00000554600 RAD51Q06609 339 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 SERINC3Q13530 473 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 ACAP1Q15027 740 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 HLA-BQ31612 363 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 SLC45A4Q5BKX6 768 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 KCNT1Q5JUK3 1230 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 ATXN7L2Q5T6C5 722 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-213ENST00000554600 AGBL4Q5VU57 503 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 FBXL19Q6PCT2 694 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 IL27RAQ6UWB1 636 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 RFX8Q6ZV50 586 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 ERN2Q76MJ5 926 aaKnown RBP10.85□□□□□ -0.67
SHMT2-213ENST00000554600 UMODL1-AS1Q8N2C9 162 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 PAF1Q8N7H5 531 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 C1orf216Q8TAB5 229 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 ZNF564Q8TBZ8 553 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-213ENST00000554600 KLK6Q92876 244 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 ISG20Q96AZ6 181 aaKnown RBP10.85□□□□□ -0.67
SHMT2-213ENST00000554600 SKA1Q96BD8 255 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 SERAC1Q96JX3 654 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 GDAP1L1Q96MZ0 367 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 DNAJC7Q99615 494 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 MYOCQ99972 504 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 KLC2Q9H0B6 622 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 KDM4CQ9H3R0 1056 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 ABHD10Q9NUJ1 306 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.85□□□□□ -0.67
SHMT2-213ENST00000554600 UBA2Q9UBT2 640 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-213ENST00000554600 ANKRD6Q9Y2G4 727 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 SNX11Q9Y5W9 270 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 WASF2Q9Y6W5 498 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 CEP295Q9C0D2 2601 aa10.85□□□□□ -0.67
SHMT2-213ENST00000554600 KCNK3O14649 394 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 MFAP3LO75121 409 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 ZNF821O75541 412 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-213ENST00000554600 POP4O95707 220 aaKnown RBP10.84□□□□□ -0.67
SHMT2-213ENST00000554600 CD160O95971 181 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 IGSF6O95976 241 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 GSRP00390 522 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 UGT2B4P06133 528 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 H2AFZP0C0S5 128 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 TCF4P15884 667 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms