RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 FAM131BQ86XD5 332 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 DCP1BQ8IZD4 617 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 OVCA2Q8WZ82 227 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 OLFM3Q96PB7 478 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 CLIC5Q9NZA1 410 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 GAKO14976 1311 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 USP6P35125 1406 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 SCN8AQ9UQD0 1980 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 A0A1B0GW55 424 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 MTX2O75431 263 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 BAIAP3O94812 1187 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ANGPTL1O95841 491 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 DUX4L2P0CJ85 424 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 DUX4L3P0CJ86 424 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 DUX4L4P0CJ87 422 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 DUX4L5P0CJ88 424 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 DUX4L6P0CJ89 424 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 DUX4L7P0CJ90 424 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 HNRNPH1P31943 449 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 NOS2P35228 1153 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 KCNK10P57789 538 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 GRAPQ13588 217 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 POU6F1Q14863 301 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 CRY2Q49AN0 593 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 NHSL2Q5HYW2 709 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 USP49Q70CQ1 688 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ANKRD23Q86SG2 305 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 LDB1Q86U70 411 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 USP38Q8NB14 1042 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 GRAPLQ8TC17 118 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 PIP5K1AQ99755 562 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 XPR1Q9UBH6 696 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 DUX4Q9UBX2 424 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 SLC6A9P48067 706 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 SPIDRQ14159 915 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 CLEC16AQ2KHT3 1053 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 KCNB2Q92953 911 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 FUBP3Q96I24 572 aaKnown RBP eCLIP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 MTMR12Q9C0I1 747 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 MTG2Q9H4K7 406 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 SMURF1Q9HCE7 757 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 KCND3Q9UK17 655 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 PLA2G4CQ9UP65 541 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 SOWAHBA6NEL2 793 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 SUPT7LO94864 414 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 DHRS4L1P0CG22 281 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 KLRC1P26715 233 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 CDKN1CP49918 316 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 BYSLQ13895 437 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 KCNV1Q6PIU1 500 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ZCCHC7Q8N3Z6 543 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 POU5F2Q8N7G0 328 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 RUSC1Q9BVN2 902 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 EHD1Q9H4M9 534 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 SEMA4BQ9NPR2 832 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 BTRCQ9Y297 605 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 TCOF1Q13428 1488 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 CLTCQ00610 1675 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ACACAQ13085 2346 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 PCNX2A6NKB5 2137 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 A0A1W2PRQ8 180 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 H3BN98 237 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 LIN7AO14910 233 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 PDE5AO76074 875 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 AMHP03971 560 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 PGAM2P15259 253 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 RPA3P35244 121 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 CYLC2Q14093 348 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 C12orf65Q9H3J6 166 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 MTMR4Q9NYA4 1195 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 TRPM5Q9NZQ8 1165 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 COPG2Q9UBF2 871 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 NEMP2A6NFY4 417 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 SH2B2O14492 632 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 CASC3O15234 703 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 PHGDHO43175 533 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 KCNAB3O43448 404 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 S100A9P06702 114 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 SRCP12931 536 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ITIH2P19823 946 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 ECH1Q13011 328 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 CHI3L2Q15782 390 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 CXorf57Q6NSI4 855 aaKnown RBP3.34□□□□□ -1.87
SYNE2-212ENST00000554584 RFWD3Q6PCD5 774 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 CYP2R1Q6VVX0 501 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 TREML1Q86YW5 311 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 BATF2Q8N1L9 274 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 DCBLD1Q8N8Z6 715 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 SERAC1Q96JX3 654 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 PACSIN1Q9BY11 444 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 BFARQ9NZS9 450 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 CFAP43Q8NDM7 1665 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 EHBP1L1Q8N3D4 1523 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 FRMPD4Q14CM0 1322 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 PNMA6FA0A0J9YX94 578 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 CLDN9O95484 217 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 SERPINA1P01009 418 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 HIST1H2ABP04908 130 aa3.34□□□□□ -1.87
SYNE2-212ENST00000554584 RPL10AP62906 217 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms