RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PHF7Q9BWX1 381 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-211ENST00000554437 POLDIP3Q9BY77 421 aaKnown RBP5.4□□□□□ -1.54
SCFD1-211ENST00000554437 ENTPD7Q9NQZ7 604 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 SEL1LQ9UBV2 794 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 CNOT7Q9UIV1 285 aaKnown RBP5.4□□□□□ -1.54
SCFD1-211ENST00000554437 FBXO9Q9UK97 447 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-211ENST00000554437 GTF2A1LQ9UNN4 478 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 CLDN16Q9Y5I7 305 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 PER2O15055 1255 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 HOXC11O43248 304 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-211ENST00000554437 GUCY1B2O75343 617 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 ADAP00813 363 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 CHRNB2P17787 502 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 XBP1P17861 261 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 PTMSP20962 102 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 BDNFP23560 247 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 PSMC2P35998 433 aaKnown RBP5.39□□□□□ -1.55
SCFD1-211ENST00000554437 AVPR1AP37288 418 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 VAMP2P63027 116 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 TDGQ13569 410 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 ME3Q16798 604 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 HEPHL1Q6MZM0 1159 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 TMEM71Q6P5X7 295 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 CTU1Q7Z7A3 348 aaKnown RBP5.39□□□□□ -1.55
SCFD1-211ENST00000554437 ZDHHC23Q8IYP9 409 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 PAF1Q8N7H5 531 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 GPATCH11Q8N954 259 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 C7orf57Q8NEG2 295 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 ENGASEQ8NFI3 743 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 RFWD2Q8NHY2 731 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 GABPB2Q8TAK5 448 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-211ENST00000554437 CEP76Q8TAP6 659 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 NSMCE1Q8WV22 266 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 RUFY2Q8WXA3 655 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 RAB40AQ8WXH6 277 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 ZBTB9Q96C00 473 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 SLC32A1Q9H598 525 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 EPHX3Q9H6B9 360 aa5.39□□□□□ -1.55
SCFD1-211ENST00000554437 RPS10-NUDT3A0A1W2PQS6 291 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 CD8B2A6NJW9 211 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 FAM157AC9JC47 383 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 CEP104O60308 925 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 CYP1A2P05177 515 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 GPD2P43304 727 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 PPP3CCP48454 512 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 ENTPD1P49961 510 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 RASSF2P50749 326 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 ARSFP54793 590 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 MAPK7Q13164 816 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 EPHA10Q5JZY3 1008 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 UBAP2Q5T6F2 1119 aaKnown RBP5.38□□□□□ -1.55
SCFD1-211ENST00000554437 DAB2IPQ5VWQ8 1189 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 SLC22A25Q6T423 547 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 IL20RBQ6UXL0 311 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 TECPR1Q7Z6L1 1165 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 CHD1LQ86WJ1 897 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 TMC8Q8IU68 726 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 TMTC1Q8IUR5 882 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 RASSF8Q8NHQ8 419 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 BICD2Q8TD16 824 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 EYA3Q99504 573 aa5.38□□□□□ -1.55
SCFD1-211ENST00000554437 TMX4Q9H1E5 349 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-211ENST00000554437 C9orf78Q9NZ63 289 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-211ENST00000554437 IFT80Q9P2H3 777 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-211ENST00000554437 A0A096LPK6 155 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 SLC25A17O43808 307 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 TOMM40O96008 361 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 HSP90AA1P07900 732 aaKnown RBP5.37□□□□□ -1.55
SCFD1-211ENST00000554437 HNRNPA1P09651 372 aaKnown RBP eCLIP5.37□□□□□ -1.55
SCFD1-211ENST00000554437 MYZAPP0CAP1 466 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 ENO3P13929 434 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-211ENST00000554437 HOXB2P14652 356 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 POLGP54098 1239 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-211ENST00000554437 CDH12P55289 794 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 SELENOVP59797 346 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 GPR18Q14330 331 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 EDRF1Q3B7T1 1238 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 DCAF12L2Q5VW00 463 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 Q6ZTK2 550 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 PRSS45Q7RTY3 260 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 PCGF5Q86SE9 256 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 MON1AQ86VX9 555 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 FAM9BQ8IZU0 186 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 CPXM2Q8N436 756 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 ESX1Q8N693 406 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 OR4N2Q8NGD1 307 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 NOC3LQ8WTT2 800 aaKnown RBP5.37□□□□□ -1.55
SCFD1-211ENST00000554437 HTRA1Q92743 480 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 LHPPQ9H008 270 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 RBM38Q9H0Z9 239 aaKnown RBP5.37□□□□□ -1.55
SCFD1-211ENST00000554437 KLHL31Q9H511 634 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 KRCC1Q9NPI7 259 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-211ENST00000554437 NCKIPSDQ9NZQ3 722 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 PDP2Q9P2J9 529 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 SLC13A4Q9UKG4 626 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 TBX20Q9UMR3 447 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 RPS6KL1Q9Y6S9 549 aa5.37□□□□□ -1.55
SCFD1-211ENST00000554437 TTC3P53804 2025 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 CCDC196A0A1B0GTZ2 297 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 C17orf113A0A1B0GUU1 675 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms