RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 SAC3D1A6NKF1 404 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 GOLGA8JA6NMD2 632 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 CXorf49A8MYA2 514 aaPredicted RBP9.68□□□□□ -0.86
SIX4-202ENST00000554079 PDPK1O15530 556 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 MARCH6O60337 910 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 GRIN3BO60391 1043 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 MED24O75448 989 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 TIPRLO75663 272 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 SLITRK5O94991 958 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 GCNT3O95395 438 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 GOT2P00505 430 aaKnown RBP9.68□□□□□ -0.86
SIX4-202ENST00000554079 PGK2P07205 417 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 GSTM2P28161 218 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 HTR1BP28222 390 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 BNIP2Q12982 314 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 NFX1Q12986 1120 aaKnown RBP9.68□□□□□ -0.86
SIX4-202ENST00000554079 PCLAFQ15004 111 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 C5orf22Q49AR2 442 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 CLVS2Q5SYC1 327 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 CCNYL2Q5T2Q4 361 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 BBS12Q6ZW61 710 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 STXBP4Q6ZWJ1 553 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 USP51Q70EK9 711 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 ERMP1Q7Z2K6 904 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 ZNF438Q7Z4V0 828 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 LINC00523Q86TU6 105 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 RIOX2Q8IUF8 465 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 TMEM151BQ8IW70 566 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 TCAIMQ8N3R3 496 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 FAM110BQ8TC76 370 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 MAPK15Q8TD08 544 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 SLC2A14Q8TDB8 520 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 PHF10Q8WUB8 498 aaKnown RBP9.68□□□□□ -0.86
SIX4-202ENST00000554079 DDX1Q92499 740 aaKnown RBP9.68□□□□□ -0.86
SIX4-202ENST00000554079 NRBF2Q96F24 287 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 ST6GAL2Q96JF0 529 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 SLITRK1Q96PX8 696 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 CPVLQ9H3G5 476 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 DPEP3Q9H4B8 488 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 CCSER2Q9H7U1 834 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 IGSF5Q9NSI5 407 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 DDX28Q9NUL7 540 aaKnown RBP9.68□□□□□ -0.86
SIX4-202ENST00000554079 LRP2BPQ9P2M1 347 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 TRPC5Q9UL62 973 aaPredicted RBP9.68□□□□□ -0.86
SIX4-202ENST00000554079 TEX264Q9Y6I9 313 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 NAV1Q8NEY1 1877 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 ZNF804BA4D1E1 1349 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 CNTNAP2Q9UHC6 1331 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 PNMA6FA0A0J9YX94 578 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 HMX2A2RU54 273 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 CENPXA8MT69 81 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 SGK1O00141 431 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 PAPSS1O43252 624 aaPredicted RBP9.67□□□□□ -0.86
SIX4-202ENST00000554079 ACSL4O60488 711 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 AVILO75366 819 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 CYP2D6P10635 497 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 PHKG2P15735 406 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 TCN1P20061 433 aaPredicted RBP9.67□□□□□ -0.86
SIX4-202ENST00000554079 CAPGP40121 348 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 ECE1P42892 770 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 LAMC2Q13753 1193 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 TRIM25Q14258 630 aaKnown RBP9.67□□□□□ -0.86
SIX4-202ENST00000554079 ATP6AP1Q15904 470 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 TOR2AQ5JU69 321 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 STXBP5Q5T5C0 1151 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 BROXQ5VW32 411 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 ZNF772Q68DY9 489 aaPredicted RBP9.67□□□□□ -0.86
SIX4-202ENST00000554079 SDE2Q6IQ49 451 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 POTEGQ6S5H5 508 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 WDR49Q8IV35 697 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 SLC9A9Q8IVB4 645 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 NDUFAF2Q8N183 169 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 PPM1NQ8N819 430 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 POC5Q8NA72 575 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 GALNT11Q8NCW6 608 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.67□□□□□ -0.86
SIX4-202ENST00000554079 TGFBRAP1Q8WUH2 860 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 TMEM80Q96HE8 168 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 ZFYVE19Q96K21 471 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 KREMEN1Q96MU8 473 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 OR52B2Q96RD2 323 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 LRRC40Q9H9A6 602 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 TCF7L2Q9NQB0 619 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 RPRD1BQ9NQG5 326 aaKnown RBP9.67□□□□□ -0.86
SIX4-202ENST00000554079 CHST12Q9NRB3 414 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 KLHL11Q9NVR0 708 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 PAQR5Q9NXK6 330 aaPredicted RBP9.67□□□□□ -0.86
SIX4-202ENST00000554079 MAT2BQ9NZL9 334 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 TNFRSF10DQ9UBN6 386 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 PCSK1NQ9UHG2 260 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 SFMBT1Q9UHJ3 866 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 BCS1LQ9Y276 419 aa9.67□□□□□ -0.86
SIX4-202ENST00000554079 PCP4L1A6NKN8 68 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 SNAP23O00161 211 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 SLC22A2O15244 555 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 EIF3DO15371 548 aaKnown RBP eCLIP9.66□□□□□ -0.86
SIX4-202ENST00000554079 GAS2O43903 313 aaKnown RBP9.66□□□□□ -0.86
SIX4-202ENST00000554079 DAB1O75553 588 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 SCO1O75880 301 aa9.66□□□□□ -0.86
SIX4-202ENST00000554079 IFNB1P01574 187 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms