RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 SATB2Q9UPW6 733 aa7.13□□□□□ -1.27
ATXN3-224ENST00000554040 MAPK8IP1Q9UQF2 711 aa7.13□□□□□ -1.27
ATXN3-224ENST00000554040 PCDHGA8Q9Y5G5 932 aa7.13□□□□□ -1.27
ATXN3-224ENST00000554040 CACNA1DQ01668 2161 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 ITPR2Q14571 2701 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 DBX1A6NMT0 343 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 MID1O15344 667 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 MAGEC1O60732 1142 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 RNASEH1O60930 286 aaKnown RBP7.12□□□□□ -1.27
ATXN3-224ENST00000554040 SDC3O75056 442 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 GCNT3O95395 438 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 GJB6O95452 261 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 ATP5BP06576 529 aaKnown RBP7.12□□□□□ -1.27
ATXN3-224ENST00000554040 DGKAP23743 735 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 HOXD9P28356 352 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-224ENST00000554040 ATICP31939 592 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 DUSP3P51452 185 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-224ENST00000554040 HMGN5P82970 282 aaKnown RBP7.12□□□□□ -1.27
ATXN3-224ENST00000554040 OVGP1Q12889 678 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 RILPL1Q5EBL4 403 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 C3orf38Q5JPI3 329 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 C22orf34Q6ZV56 151 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 USP53Q70EK8 1073 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 CHST9Q7L1S5 443 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 GPRIN1Q7Z2K8 1008 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 TMC6Q7Z403 805 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 KIAA0907Q7Z7F0 614 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-224ENST00000554040 SCD5Q86SK9 330 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 ZSWIM9Q86XI8 627 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 CBWD2Q8IUF1 395 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 DENND1CQ8IV53 801 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 FAM217AQ8IXS0 508 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.12□□□□□ -1.27
ATXN3-224ENST00000554040 FAM184AQ8NB25 1140 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 KCT2Q8NC54 265 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 SLC2A14Q8TDB8 520 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 HPS3Q969F9 1004 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 SGF29Q96ES7 293 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 PLPPR2Q96GM1 343 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 CDK5RAP1Q96SZ6 601 aaKnown RBP7.12□□□□□ -1.27
ATXN3-224ENST00000554040 OMDQ99983 421 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 C19orf73Q9NVV2 129 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 PAXBP1Q9Y5B6 917 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 CSMD1Q96PZ7 3565 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 POLQO75417 2590 aa7.12□□□□□ -1.27
ATXN3-224ENST00000554040 HHLA1C9JL84 531 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 LATO43561 262 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 PPFIA2O75334 1257 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 RNASEH2AO75792 299 aaKnown RBP7.11□□□□□ -1.27
ATXN3-224ENST00000554040 HMBSP08397 361 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 GIMD1P0DJR0 217 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 DLATP10515 647 aaKnown RBP7.11□□□□□ -1.27
ATXN3-224ENST00000554040 RALAP11233 206 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 PABPC1P11940 636 aaKnown RBP7.11□□□□□ -1.27
ATXN3-224ENST00000554040 CCDC130P13994 396 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 GOT1P17174 413 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 GAP43P17677 238 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 TNNI1P19237 187 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 SLC8A1P32418 973 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 HARS2P49590 506 aaKnown RBP7.11□□□□□ -1.27
ATXN3-224ENST00000554040 CASP5P51878 434 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 NEK4P51957 841 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 KIF11P52732 1056 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 MYL6P60660 151 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 TRPC3Q13507 836 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 ALCAMQ13740 583 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 STAT4Q14765 748 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 CST6Q15828 149 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 BMT2Q1RMZ1 405 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 MPPE1Q53F39 396 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 MBLAC2Q68D91 279 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 NAPEPLDQ6IQ20 393 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 SPOCD1Q6ZMY3 1216 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 CLEC14AQ86T13 490 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 ACOT1Q86TX2 421 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 PRPF39Q86UA1 669 aaKnown RBP7.11□□□□□ -1.27
ATXN3-224ENST00000554040 ZC3H3Q8IXZ2 948 aaKnown RBP7.11□□□□□ -1.27
ATXN3-224ENST00000554040 AHI1Q8N157 1196 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 CRYBG2Q8N1P7 616 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 ARL14Q8N4G2 192 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 FAM26EQ8N5C1 309 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 OR14C36Q8NHC7 312 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 ZNF507Q8TCN5 953 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 MAPK15Q8TD08 544 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 SYAP1Q96A49 352 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-224ENST00000554040 ELMO3Q96BJ8 720 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 DNAJC19Q96DA6 116 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 ATXN7L3BQ96GX2 97 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 XYLT2Q9H1B5 865 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 SLC25A18Q9H1K4 315 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 MTG2Q9H4K7 406 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 SMYD3Q9H7B4 428 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 USP29Q9HBJ7 922 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 KIAA1586Q9HCI6 787 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 ABCB8Q9NUT2 735 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 KLHL11Q9NVR0 708 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 UCKL1Q9NWZ5 548 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 CLIC5Q9NZA1 410 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 ARHGAP20Q9P2F6 1191 aa7.11□□□□□ -1.27
ATXN3-224ENST00000554040 RASAL2Q9UJF2 1139 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms