RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 METTL6Q8TCB7 284 aa3.86□□□□□ -1.79
EFCAB11-204ENST00000553871 HDAC7Q8WUI4 952 aa3.86□□□□□ -1.79
EFCAB11-204ENST00000553871 EME1Q96AY2 570 aa3.86□□□□□ -1.79
EFCAB11-204ENST00000553871 KLHL15Q96M94 604 aa3.86□□□□□ -1.79
EFCAB11-204ENST00000553871 TIGD1Q96MW7 591 aa3.86□□□□□ -1.79
EFCAB11-204ENST00000553871 PNRC2Q9NPJ4 139 aaKnown RBP3.86□□□□□ -1.79
EFCAB11-204ENST00000553871 SNTG1Q9NSN8 517 aa3.86□□□□□ -1.79
EFCAB11-204ENST00000553871 ZDHHC7Q9NXF8 308 aa3.86□□□□□ -1.79
EFCAB11-204ENST00000553871 KIAA1456Q9P272 454 aa3.86□□□□□ -1.79
EFCAB11-204ENST00000553871 LAS1LQ9Y4W2 734 aaKnown RBP3.86□□□□□ -1.79
EFCAB11-204ENST00000553871 PCDHGB5Q9Y5G0 923 aa3.86□□□□□ -1.79
EFCAB11-204ENST00000553871 CLDN16Q9Y5I7 305 aa3.86□□□□□ -1.79
EFCAB11-204ENST00000553871 SLC4A4Q9Y6R1 1079 aa3.86□□□□□ -1.79
EFCAB11-204ENST00000553871 COL11A2P13942 1736 aaPredicted RBP3.86□□□□□ -1.79
EFCAB11-204ENST00000553871 A0A096LPK6 155 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 TRBV5-3A0A0A0MS03 114 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 TYW5A2RUC4 315 aaKnown RBP3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 C17orf102A2RUQ5 167 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 DDTLA6NHG4 134 aaPredicted RBP3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 E5RJQ4 531 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 SLC25A17O43808 307 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 ZC3H11AO75152 810 aaKnown RBP eCLIP3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 TACC1O75410 805 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 TMEM63AO94886 807 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 SPARCP09486 303 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 IRF1P10914 325 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 UBL4AP11441 157 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 UNGP13051 313 aaPredicted RBP3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 CAPN3P20807 821 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 EPHA8P29322 1005 aaPredicted RBP3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 GPR12P47775 334 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 NANOS3P60323 173 aaKnown RBP3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 DCTN2Q13561 401 aaKnown RBP3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 TAF11Q15544 211 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 TBCEQ15813 527 aaPredicted RBP3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 SMTNL2Q2TAL5 461 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 PRICKLE4Q2TBC4 344 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 Q4G0T1 1027 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 SLC9B1Q4ZJI4 515 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 MTX3Q5HYI7 312 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 LCE5AQ5TCM9 118 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 SERTAD4-AS1Q5TG53 156 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 INO80CQ6PI98 192 aaPredicted RBP3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 SHC4Q6S5L8 630 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 C17orf99Q6UX52 265 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 DEF8Q6ZN54 512 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 SERPINA11Q86U17 422 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 GPAT4Q86UL3 456 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 TMC8Q8IU68 726 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 LURAP1LQ8IV03 231 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 PLD5Q8N7P1 536 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 RASSF8Q8NHQ8 419 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 KCNG4Q8TDN1 519 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 ADAMTS15Q8TE58 950 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 WDR83Q9BRX9 315 aaKnown RBP3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 NUF2Q9BZD4 464 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 RANBP17Q9H2T7 1088 aaKnown RBP3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 TASP1Q9H6P5 420 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 DIAPH3Q9NSV4 1193 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 TRNAU1APQ9NX07 287 aaKnown RBP3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 PLEKHB1Q9UF11 243 aaPredicted RBP3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 FBXO2Q9UK22 296 aaPredicted RBP3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 NAALADL1Q9UQQ1 740 aa3.85□□□□□ -1.79
EFCAB11-204ENST00000553871 ARHGEF17Q96PE2 2063 aaPredicted RBP3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 TRBV5-7A0A0A0MS05 114 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 FAM157AC9JC47 383 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 MASP2O00187 686 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 TNFSF14O43557 240 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 TLR2O60603 784 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 ZBED4O75132 1171 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 CCNDBP1O95273 360 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 CELA2AP08217 269 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 MMP3P08254 477 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 PCNAP12004 261 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 HOXD9P28356 352 aaPredicted RBP3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 PTGER1P34995 402 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 ARL3P36405 182 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 RXRGP48443 463 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 POLD2P49005 469 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 ARF3P61204 181 aaPredicted RBP3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 ARF1P84077 181 aaKnown RBP3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 GOLGA8DPQ0D2H9 430 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 PPP2R5BQ15173 497 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 TRIP6Q15654 476 aaKnown RBP3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 INPP5JQ15735 1006 aaPredicted RBP3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 PIK3CD-AS1Q5SR53 167 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 PXDC1Q5TGL8 231 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 MORN5Q5VZ52 161 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 TBC1D9BQ66K14 1250 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 ZNF626Q68DY1 528 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 NCAPH2Q6IBW4 605 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 CES5AQ6NT32 575 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 TMTC3Q6ZXV5 915 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 TRAPPC11Q7Z392 1133 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 CAMK1DQ8IU85 385 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.84□□□□□ -1.794e-6■■□□□ 12.7
EFCAB11-204ENST00000553871 FAM217AQ8IXS0 508 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 HORMAD2Q8N7B1 307 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 CADM4Q8NFZ8 388 aa3.84□□□□□ -1.79
EFCAB11-204ENST00000553871 SMARCE1Q969G3 411 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms