RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 MAP9Q49MG5 647 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 TTC39BQ5VTQ0 682 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-208ENST00000553868 NPNTQ6UXI9 565 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 DENND1CQ8IV53 801 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 ALLCQ8N6M5 410 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 RTL3Q8N8U3 475 aaKnown RBP14.79□□□□□ -0.04
SHMT2-208ENST00000553868 BBOF1Q8ND07 529 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 OR2I1PQ8NGU4 316 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 RPLP0P6Q8NHW5 317 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.79□□□□□ -0.04
SHMT2-208ENST00000553868 RPRD1AQ96P16 312 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-208ENST00000553868 ATXN2Q99700 1313 aaKnown RBP14.79□□□□□ -0.04
SHMT2-208ENST00000553868 FAM118BQ9BPY3 351 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 ERP44Q9BS26 406 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 FAM129AQ9BZQ8 928 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 EPB41L5Q9HCM4 733 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 GKN1Q9NS71 199 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 SMPD4Q9NXE4 827 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 DTLQ9NZJ0 730 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 SAE1Q9UBE0 346 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-208ENST00000553868 ASIC3Q9UHC3 531 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 EVLQ9UI08 416 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-208ENST00000553868 XPO7Q9UIA9 1087 aaKnown RBP14.79□□□□□ -0.04
SHMT2-208ENST00000553868 RAB21Q9UL25 225 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 VANGL2Q9ULK5 521 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 ARHGAP26Q9UNA1 814 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 SH3BP1Q9Y3L3 701 aa14.79□□□□□ -0.04
SHMT2-208ENST00000553868 TYW5A2RUC4 315 aaKnown RBP14.78□□□□□ -0.04
SHMT2-208ENST00000553868 DRGXA6NNA5 263 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 MTSS1O43312 755 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 MFSD11O43934 449 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 PRAMEF12O95522 483 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 GGCXP38435 758 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 DMC1Q14565 340 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 ITPRIPL2Q3MIP1 535 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 SLC45A4Q5BKX6 768 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 ADGRF1Q5T601 910 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 FBXL22Q6P050 247 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 C4orf22Q6V702 233 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 ZC3H18Q86VM9 953 aaKnown RBP14.78□□□□□ -0.04
SHMT2-208ENST00000553868 MARCH9Q86YJ5 346 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 LRRC49Q8IUZ0 686 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 ZNF843Q8N446 348 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 TFB1MQ8WVM0 346 aaKnown RBP14.78□□□□□ -0.04
SHMT2-208ENST00000553868 ZFRQ96KR1 1074 aaKnown RBP14.78□□□□□ -0.04
SHMT2-208ENST00000553868 QKIQ96PU8 341 aaKnown RBP eCLIP14.78□□□□□ -0.04
SHMT2-208ENST00000553868 CYP2S1Q96SQ9 504 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 PRMT1Q99873 361 aaKnown RBP14.78□□□□□ -0.04
SHMT2-208ENST00000553868 GTPBP2Q9BX10 602 aaKnown RBP14.78□□□□□ -0.04
SHMT2-208ENST00000553868 NUSAP1Q9BXS6 441 aaKnown RBP14.78□□□□□ -0.04
SHMT2-208ENST00000553868 SLC46A2Q9BY10 475 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 SMG9Q9H0W8 520 aaKnown RBP14.78□□□□□ -0.04
SHMT2-208ENST00000553868 PCDH9Q9HC56 1237 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 GDF3Q9NR23 364 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 ETNK2Q9NVF9 386 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 EBF1Q9UH73 591 aa14.78□□□□□ -0.04
SHMT2-208ENST00000553868 DMGDHQ9UI17 866 aaKnown RBP14.78□□□□□ -0.04
SHMT2-208ENST00000553868 TNRC6BQ9UPQ9 1833 aaKnown RBP14.78□□□□□ -0.04
SHMT2-208ENST00000553868 CCDC151A5D8V7 595 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 PYCARD-AS1I3L0S3 204 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 KRT14P02533 472 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 MAPKAPK2P49137 400 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 MRPS25P82663 173 aaKnown RBP14.77□□□□□ -0.05
SHMT2-208ENST00000553868 ZNF33AQ06730 810 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 CALCOCO2Q13137 446 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 C5orf22Q49AR2 442 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 TRIM68Q6AZZ1 485 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 C14orf80Q86SX3 495 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 ZNF683Q8IZ20 524 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 CMTM8Q8IZV2 173 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 LGI2Q8N0V4 545 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 SEC14L1Q92503 715 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 EZH1Q92800 747 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-208ENST00000553868 LRRC45Q96CN5 670 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 OLFM3Q96PB7 478 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 SLC22A12Q96S37 553 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 PNKPQ96T60 521 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 TRIM51Q9BSJ1 452 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 TMEM121Q9BTD3 319 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 TMEM248Q9NWD8 314 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 CFAP97Q9P2B7 532 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 STOML2Q9UJZ1 356 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 AGO1Q9UL18 857 aaKnown RBP14.77□□□□□ -0.05
SHMT2-208ENST00000553868 NEU3Q9UQ49 428 aa14.77□□□□□ -0.05
SHMT2-208ENST00000553868 NUP210Q8TEM1 1887 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-208ENST00000553868 PTPRBP23467 1997 aa14.76□□□□□ -0.05
SHMT2-208ENST00000553868 SPTA1P02549 2419 aa14.76□□□□□ -0.05
SHMT2-208ENST00000553868 E2F8A0AVK6 867 aa14.76□□□□□ -0.05
SHMT2-208ENST00000553868 UPK3BL1B0FP48 263 aa14.76□□□□□ -0.05
SHMT2-208ENST00000553868 UPK3BL2E5RIL1 263 aa14.76□□□□□ -0.05
SHMT2-208ENST00000553868 TRDMT1O14717 391 aaKnown RBP14.76□□□□□ -0.05
SHMT2-208ENST00000553868 IFNB1P01574 187 aa14.76□□□□□ -0.05
SHMT2-208ENST00000553868 CHKAP35790 457 aa14.76□□□□□ -0.05
SHMT2-208ENST00000553868 ADCY8P40145 1251 aa14.76□□□□□ -0.05
SHMT2-208ENST00000553868 PTGER3P43115 390 aa14.76□□□□□ -0.05
SHMT2-208ENST00000553868 NDST2P52849 883 aa14.76□□□□□ -0.05
SHMT2-208ENST00000553868 VSNL1P62760 191 aa14.76□□□□□ -0.05
SHMT2-208ENST00000553868 CAV1Q03135 178 aa14.76□□□□□ -0.05
SHMT2-208ENST00000553868 GALNT2Q10471 571 aa14.76□□□□□ -0.05
SHMT2-208ENST00000553868 SLC10A2Q12908 348 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms